Synthesis and crystal structure of complex [Mn(Imdc)<Subscript>2</Subscript>(H<Subscript>2</Subscript>O)<Subscript>2</Subscript>] · 2H<Subscript>2</Subscript>O and its interaction with DNA

Under hydrothermal conditions, the complex [Mn(lmdc)₂(H₂O)₂] · 2H₂O (I) was synthesized and characterized by elemental analysis and IR spectrum (HImdc = 4,5-imidazofedicarboxylic acid). The crystal structure of I was determined by single-crystal X-ray diffraction (crystallizing in the monoclinic crystal system, P ₂/c space group, a = 11.000(2), b = 7.1281(14), c = 12.696(3) Å, β = 122.45(3), Z = 2. In I, the Mn²⁺ ion was chelated by two Imdc with one of their nitrogen atoms and a carboxylic oxygen atom, while two water molecules occupy the axial position of the Mn atom forming a distorted octahedral geometry. Three-dimensional structure of I was formed by intermolecular hydrogen bonds. UV-Vis and fluorescence spectra of I interacting with DNA show that insertion is the main binding mode between I and fish sperm DNA. Gel electrophoresis shows that I cleaves both supercoiled and circular pBR322 DNA to form a small molecular fragment.     

Synthesis and X-ray diffraction study of Li(H<Subscript>3</Subscript>O)[UO<Subscript>2</Subscript>(C<Subscript>2</Subscript>O<Subscript>4</Subscript>)<Subscript>2</Subscript>(H<Subscript>2</Subscript>O)] · H<Subscript>2</Subscript>O

Single crystals of Li(H₃O)[UO₂(C₂O₄)₂(H₂O)] · H₂O (I) have been synthesized and studied by X-ray diffraction. Compound I crystallizes in the monoclinic crystal system with the unit cell parameters: a = 7.1682(10) Å, b = 29.639(6) Å, c = 6.6770(12) Å, β= 112.3(7)°, space group P 2₁/c, Z = 4, R = 4.36%. Structure I contains discrete mononuclear groups [UO₂(C₂O₄)₂(H₂O)]^2? ascribed to the crystal-chemical group AB ₂ ⁰¹ M¹ (A = UO₂ ²⁺, B⁰¹ =C₂O ₄ ^2? , M¹ = H₂O), which are “cross-linked” by the lithium ions into infinite layers {Li(UO₂)(C₂O₄)₂(H₂O)₂}^? perpendicular to [010]. The hydroxonium ions are located between adjacent uranium-containing layers. A hydrogen bond system involving water molecules, oxalate ions, and hydroxonium combines the anionic layers into a three-dimensional framework.     

Crystal structure of Mg pivalate hydrate Mg(H<Subscript>2</Subscript>O)<Subscript>6</Subscript>(Piv)<Subscript>2</Subscript> · 3H<Subscript>2</Subscript>O

Single crystals of Mg pivalate hydrate, Mg(H₂O)₆(Piv)₂ · 3H₂O (HPiv = (CH₃)₃CCOOH) are synthesized and their structure is determined by X-ray diffraction method. The crystals are rhombic: a = 10.917(2) Å, b = 12.625(2) Å, c = 31.394(8) Å, Z = 8, space group Pbca, R ₁ = 0.0525. The Mg atom has octahedral surrounding of the O atoms of water molecules (Mg-O 2.044–2.137 Å). The cationic chains of [Mg(H₂O)₆] _∞ ²⁺ lie in the voids of doubled network anionic layers of [(H₂O)₃(Piv)₂] _∞∞ ^2? . Inside the layer, the pivalate anions alternate with water molecules in the xy plane, being bonded to them by hydrogen bonds. The cationic chains and the anionic layers are united into layered packs by hydrogen bonds between coordinated water molecules and pivalate anions and between coordinated and crystal hydrate water molecules.     

Phase and extraction equilibria in H<Subscript>2</Subscript>O–sulfonol–HCl (H<Subscript>2</Subscript>SO<Subscript>4</Subscript>) and H<Subscript>2</Subscript>O–sodium dodecyl sulfate–HCl (H<Subscript>2</Subscript>SO<Subscript>4</Subscript>) systems

Solubility isotherms of water–sulfonol–hydrochloric (or sulfuric) acid and water–sodium dodecyl sulfate–hydrochloric acid systems at 75°C and a water–sodium dodecyl sulfate–sulfuric acid system at 50°C are constructed. Regions of two-phase liquid equilibrium suitable for use in extraction are found. Concentration parameters for extraction are determined. The interfacial distribution of a series of metal ions with and without such additional complexing reagents as diantipyrylmethane and diantipyrylheptane is studied.     

Synthesis,Structure and Property of Oxo-Bridged Binuclear Iron(III) Complex [Fe(phen)(H<Subscript>2</Subscript>O)<Subscript>3</Subscript>]<Subscript>2</Subscript>O⋅2SO<Subscript>4</Subscript>

An oxo-bridged binuclear iron(III) complex, [Fe(phen)(H₂O)₃]₂O2SO₄, has been synthesized and structurally characterized by elemental analysis (EA), IR, TG-DSC and X-ray. Its crystal structure has been determined by X-ray crystallography. It crystallizes in the orthorhombic system, space group P2₁2₁2, with lattice parameters a = 17.650(4), b = 8.5133(17), c = 9.971(2) Å; V = 1498.2(5) ų, _calcd = 1.763 g/cm³ and Z = 4 for R₁ = 0.0601. The crystal structure indicated that two octahedrally coordinated iron(III) ions bridged with oxygen atoms formed a non-linear complex. The bond angle of Fe–O–Fe is 163.9(4). The data of EA and IR are in good agreement with the crystal structure. The thermal gravity (TG) data indicate that there are four decomposition steps with three endothermic peaks. The final product of the thermal decomposition may be Fe(C₂H₈N₂)SO₄.     

Crystal structure and quantum chemical investigation of [Cd(NTO)<Subscript>4</Subscript>Cd(H<Subscript>2</Subscript>O)<Subscript>6</Subscript>] · 4H<Subscript>2</Subscript>O

[Cd(NTO)₄Cd(H₂O)₆] •4H₂O was synthesized by mixing the aqueous solution of 3-nitro-1, 2,4-triazol-5-one (NTO) and cadmium carbonate. The single crystal structure was determined by a four-circle X-ray diffractometer. The crystal is monoclinic, space group C2/c with crystal parameters of a = 2.1229(3) nm, b = 0.6261(8) nm, = 2.1165(3) nm, β= 90.602 (3)°, V= 2.977(6) nm₃, Z = 4, D_c = 2.055 g • cm_-3, μ = 15.45 cm_-1 and F(000) = 1824. 2523 observable independent reflections with F₀4σ(F₀) were used for the determination and refinement of the crystal structure. Lorentz-polarization and absorption correction were applied. The final R is 0.0282 and wR = 0.0792. The analytical results show that the Cd⁺² has two kinds of coordinate bonds in one crystal. One Cd⁺² coordinates with 4 NTO anions and another coordinates with 6 water molecules to form a binucleate complex with a structure of tetrahedron and tetragonal bipyramid, respectively. By using SCF-PM3-MO method, the electron structure of cadmium complex of NTO has been calculated. The analysis of the calculated results shows that when [Cd(NTO)₄Cd(H₂O)₆] • 4H₂O is heated, the crystallization waters will be dissociated first and the ligand waters second and NO₂ group has priority of leaving when NTO⁻ is decomposed. Analysis of the energy level and composition of localized molecular orbitals indicates that both the two Cd²⁺ bond to the coordinating atom with 5s     

Synthesis and crystal structures of [K(H<Subscript>2</Subscript>O)(Piv)]<Subscript>∞</Subscript> and [K<Subscript>2</Subscript>(Phen)(H<Subscript>2</Subscript>O)<Subscript>2</Subscript>(Piv)<Subscript>2</Subscript>]<Subscript>∞</Subscript>

A method for the synthesis of potassium pivalates (trimethylacetates) from potassium tert-butoxide and pivalic acid was proposed. The complexes of the formulas [K(H₂O)(Piv)]_∞(I) and [K₂(Phen)(H₂O)₂(Piv)₂]_∞ (II) (Piv denotes the pivalate anion and Phen denotes 1,10-phenanthroline) were obtained and characterized by elemental analysis and IR and ¹H NMR spectroscopy. The crystal structures of complexes I and II were determined using X-ray diffraction. Crystal structure I has a layered motif with two nonequivalent K atoms (C.N.s 5 + 2 and 6). The coordination of phenanthroline in II gives rise to a ribbon motif, the structure containing three nonequivalent K atoms (C.N.s 6, 6 + 1, and 8).     

Synthesis and crystal structure of the complex [Nd(2-EOBA)<Subscript>3</Subscript>(phen)(H<Subscript>2</Subscript>O)]<Subscript>2</Subscript> · H<Subscript>2</Subscript>O

A novel lanthanide complex of [Nd(2-EOBA)₃(phen)(H₂O)]₂ · H₂O (2-EOBA = 2-ethoxylbenzoate, phen = 1,10-phenanthroline), has been synthesized and structurally characterized by single crystal X-ray diffraction. The complex crystallizes in monoclinic, space group P2(1)/n with a = 14.7453(18) Å, b = 12.3628(15) Å, c = 19.473(2) Å, α = 90°, β = 93.349(2)°, γ = 90°. Two Nd³⁺ ions are connected together by two bridging 2-EOBA ligands and each Nd³⁺ ion is further coordinated by two chelating 2-EOBA ligands, one chelating phen molecule and one water molecule. The coordination number of Nd³⁺ ion is nine. The coordination geometry of Nd³⁺ ion is a distorted monocapped square-antiprism.     

Synthesis and Crystal Structure of [Co(H<Subscript>2</Subscript>O)<Subscript>6</Subscript>](C<Subscript>19</Subscript>H<Subscript>17</Subscript>O<Subscript>4</Subscript>SO<Subscript>3</Subscript>)<Subscript>2</Subscript>⋅8H<Subscript>2</Subscript>O

The title compound, cobalt 4′,7-diethoxylisoflavone-3′-sulfonate([Co(H₂O)₆](X)₂⋅8H₂O, X = C₁₉H₁₇O₄SO₃) was synthesized and its structure was determined by single-crystal X-ray diffraction analysis. It crystallizes in the triclinic space group P-1 with cell parameters a = 9.026(3) Å, b = 16.431(5) Å, c = 18.195(6) Å, α = 72.289(4)^∘, β = 87.498(4)^∘, γ = 82.775(5)^∘, V = 2550.1(13) Å⁻³, D_c = 1.419 Mg m⁻³, and Z = 2. The results show that the title compound consists of one cobalt cation, six coordinated water molecules, eight lattice water molecules, and two 4′,7-diethoxylisoflavone-3′-sulfonate anions, C₁₉H₁₇O₄SO⁻₃. Two anions have different conformations. Twelve H atoms of six coordinated water molecules, as donors, form hydrogen bonds with four oxygen atoms of sulfo-groups of two anions and eight oxygen atoms of eight lattice water molecules. In addition, π < eqid1 > ⋅ < eqid2 > π stacking interactions exist in the crystal structure, which together with hydrogen bonds lead to supramolecular formation with a three-dimensional network.     

The crystal structure of [Mg(H<Subscript>2</Subscript>O)<Subscript>6</Subscript>][VO(edta)] · 3.5H<Subscript>2</Subscript>O

The crystal structure of complex [Mg(H₂O)₆][VO(edta)] · 3.5H₂O (I) was determined by X-ray diffraction study. The crystals are monoclinic, a = 6.779 Å, b = 13.373(6) Å, c = 25.054 Å, β = 96.55°, Z = 4, space group P2₁. The unit cell contains two independent [VO(edta)]^2? anions, two independent [Mg(H₂O)₆]²⁺ cations, and seven crystal-water molecules. The coordination polyhedron of each vanadium atom is formed by five donor atoms of the edta ligand (2N + 3O) (V(1)-N(1), 2.278 Å; V(1)-N(2), 2.149 Å; V(2)-N(3), 2.301 Å; V(2)-N(4), 2.165 Å; V-O(acet), 2.00 ± 0.02 Å) and the oxygen atom of the oxo group (V-O, 1.60 ± 0.01 Å). The edta ligands and the vanadium atom form three glycinate rings: two R-type rings and one G-type ring (one acetate branch remains free), as well as an E-type ring with an asymmetric gauche configuration. The [Mg(H₂O)₆] cations are slightly distorted octahedra (Mg-O, 2.013–2.132 Å, the OMgO angles are 86.6°–94.2°). The H₂O molecules form a bifurcate system of H-bonds. The crystals of compound I belong to OD-type structures with an incomplete ordering of layers.     

Crystal structure and spectroscopic properties of ciprofloxacinium pentachloroantimonate(III) monohydrate (C<Subscript>17</Subscript>H<Subscript>19</Subscript>N<Subscript>3</Subscript>O<Subscript>3</Subscript>F)SbCl<Subscript>5</Subscript> · H<Subscript>2</Subscript>O

Synthesis, X-ray diffraction, IR and luminescence spectroscopic studies of the monohydrate of pentachloroantimonate(III) of doubly protonated ciprofloxacin (C₁₇H₁₉N₃O₃F)SbCl₅ · H₂O (I) were performed. The structure of I is formed by SbCl₆ octahedra combined into polymeric chains [SbCl₅] _n ^2n? through common vertices, ciprofloxacinium cations (CfH₃)²⁺, and water molecules linked by hydrogen bonds. CfH is protonated at the carbonyl oxygen atom and the terminal nitrogen atom of the piperazinyl group. The electronic and geometric aspects determining the luminescence properties of I and of related compounds are discussed.     

Clathrate [Zn(C<Subscript>6</Subscript>H<Subscript>5</Subscript>COO)<Subscript>2</Subscript>(H<Subscript>2</Subscript>O)<Subscript>2</Subscript>] · 2CH<Subscript>3</Subscript>COOH: Synthesis and crystal structure

The clathrate [Zn(C₆H₅COO)₂(H₂O)₂] · 2CH₃COOH (I) was obtained for the first time from zinc(II) benzoate. The individuality, the unit cell parameters, and the number of “guest” molecules in complex I were determined from X-ray diffraction and derivatographic data. Its crystal structure was solved.     

Crystal Structure of Neptunium(V) Acetate [(NpO<Subscript>2</Subscript>)<Subscript>2</Subscript>(OOCCH<Subscript>3</Subscript>)<Subscript>2</Subscript>(H<Subscript>2</Subscript>O)] ⋅ 2H<Subscript>2</Subscript>O

A new neptunium(V) complex [(NpO₂)₂(CH₃COO)₂(H₂O)] ? 2H₂O was synthesized and its crystal structure was determined. The unit cell parameters are: a = 24.007(10) Å, b = 6.779(3) Å, c = 8.076(3) Å, space group Pnma, Z = 4, V = 1314.2(9) ų, R = 0.049, wR(F²) = 0.105. The crystal structure of the compound is composed of neutral [(NpO₂)₂(CH₃COO)₂(H₂O)] layers and molecules of the water of crystallization. Each of the crystallographically independent neptunoyl ions performs a bidentate function thus forming a composite system of cation-cation bonds.     

Crystal structure of barium bis(nitrilotriacetato)cobaltate(III), Ba<Subscript>3</Subscript>[Co(Nta)<Subscript>2</Subscript>]<Subscript>2</Subscript> · 10H<Subscript>2</Subscript>O

Crystals of Ba₃[Co(Nta)₂]₂ · 10H₂O (Nta^3? is the ion of nitrilotriacetic acid) are obtained (monoclinic crystal system, a = 17.094(3), b = 13.1873(13), c = 21.490(3) Å, β = 98.457(18)°, Z = 4, space group I2/c). The crystal structure of the compound is determined by X-ray diffraction analysis. The crystals consist of the Ba²⁺ cations, water molecules, and [Co(Nta)₂]^3? anions in which the donor N and 2O atoms of each Nta^3? ion are located at opposite faces of the coordination octahedron. The Co(1, 2) atoms are arranged in the inversion centers. The Ba atoms of the complexes form an intricate three-dimensional framework. One of the two crystallographically nonequivalent complexes binds eight Ba atoms, and another one binds six Ba atoms. The coordination number of the Ba(1) atoms (in the general position) is nine (three O atoms of water molecules and six O atoms of the carboxyl groups of five complexes), and that of the Ba(2) atoms (on the 2 axis) is 6 (two O atoms of water molecules and four O atoms of the carboxyl groups of four complexes).     

Molar heat capacity and thermodynamic properties of crystalline [Nd(Glu)(H<Subscript>2</Subscript>O)<Subscript>5</Subscript>(Im)<Subscript>3</Subscript>](ClO<Subscript>4</Subscript>)<Subscript>6</Subscript>·2H<Subscript>2</Subscript>O

A complex of neodymium perchloric acid coordinated with L-glutamic acid and imidazole, [Nd(Glu)(H₂O)₅(Im)₃](ClO₄)₆·2H₂O was synthesized and characterized by IR and elements analysis for the first time. The thermodynamic properties of the complex were studied with an automatic adiabatic calorimeter and differential scanning calorimetry (DSC). Glass transition and phase transition were discovered at 221.83 and 245.45 K, respectively. The glass transition was interpreted as a freezing-in phenomenon of the reorientational motion of ClO₄⁻ ions and the phase transition was attributed to the orientational order/disorder process of ClO₄⁻ ions. The heat capacities of the complex were measured with the automatic adiabatic calorimeter and the thermodynamic functions [H _T-H _298.15] and [S _T-S _298.15] were derived in the temperature range from 80 to 390 K with temperature interval of 5 K. Thermal decomposition behavior of the complex in nitrogen atmosphere was studied by thermogravimetric (TG) analysis and differential scanning calorimetry (DSC).     

Synthesis and structural characterization of a novel tetranuclear Cu(II) complex: [Cu<Subscript>4</Subscript>L<Subscript>2</Subscript>(pic)<Subscript>4</Subscript>(H<Subscript>2</Subscript>O)<Subscript>2</Subscript>]·2H<Subscript>2</Subscript>O

A novel Salen-type bisoxime ligand, 6,6′-dimethoxy-2,2′-[(1,4-butylene)dioxybis(nitrilomethylidyne)]diphenol (H₂L) and its tetranuclear Cu(II) complex, [Cu₄L₂(pic)₄(H₂O)₂]·2H₂O, have been synthesized and characterized by elemental analyses, IR, TG-DTA and ¹H-NMR etc. The X-ray crystal structure of the complex reveals that formation of a tetranuclear structure, which consists of four copper(II) atoms, two pentadentate L²⁻units, four picratols, two coordinated water molecules and two crystallizing water molecules. Around four copper ions are all octahedral geometries. It was demonstrated that the picratols in the tetranuclear copper(II) complex show a novel tridentate coordination mode.     

Hydrothermal synthesis and crystal structure of a novel nickel(II) complex: [Ni(H<Subscript>2</Subscript>Bibzim)<Subscript>3</Subscript>Cl<Subscript>2</Subscript> · 2H<Subscript>2</Subscript>O] (H<Subscript>2</Subscript>Bibzim = 2,2-Bibenzimidazole)

A novel organic-inorganic hybrid compound based on weak intermolecular interactions formulated as Ni(H₂Bibzim)₃Cl₂ · 2H₂O (H₂Bibzim = 2,2-bibenzimidazole, formula, C₁₄H₁₀N₄) has been synthesized under hydrothermal conditions and characterized by elemental analysis, single-crystal X-ray diffraction analyses, and IR spectra. It crystallizes in the orthorhombic system, space group Pbcn, Z = 2, a = 20.8530(19), b = 15.7838(14), c = 12.3159(11) Å, V = 4053.7(6) ų, M _r = 1736.84, ρ_c = 1.423g/cm³, λ = 0.71073 Å, μ(MoK _α) = 0.664 mm^?1, F(000) = 1792, R = 0.0283 and wR = 0.0707 for 3746 observed reflections with I > 2σ(I). The complex is composed of mononuclear cations [Ni(H₂Bibzim)₃]²⁺, chlorine anions, and lattice water molecules, which are linked into a two-dimensional supramolecular architectures via hydrogen bonds and π-π-stacking interactions.     

Synthesis and structure of the [Co(NioxH)<Subscript>2</Subscript>(Thio)<Subscript>2</Subscript>]<Subscript>2</Subscript>SO<Subscript>4</Subscript>·2H<Subscript>2</Subscript>O complex compound

A new Co(III) complex of 1,2-cyclohexanedionedioxime and thiocarbamide with an SO ₄ ^2? anion and solvation water molecules in the outer sphere has been synthesized and its structure has been defined. Orthorhombic crystals, a = 11.659(2) Å, b = 26.448(5) Å, c = 30.142(6) Å, V = 9295(3) Å ³, Z = 8, d_calc = 1.599 g/cm³, space group Pbca; final R index is 0.0578 for 8221 reflections with I > 2σ(I). In the octahedral Co(III) complex, two 1,2-cyclohexanedionedioxime residues lie in the equatorial plane, while two thiocarbamide molecules are in the axial plane. Intramolecular bonds: N-H…O and O-H…O type hydrogen bonds and π-π interactions that stabilize the complex cations. In crystal, the components are linked by N-H…O and O-H…O hydrogen bonds into a 3D framework.     

Synthesis and study of lead(II) uranate Pb(UO<Subscript>2</Subscript>)<Subscript>2</Subscript>O<Subscript>2</Subscript>(OH)<Subscript>2</Subscript>·H<Subscript>2</Subscript>O

An individual crystalline compound Pb(UO₂)₂O₂(OH)₂·(H₂O) was obtained by reaction of synthetic schoepite UO₃·2.25H₂O with an aqueous solution of lead(II) nitrate under hydrothermal conditions. The composition and structure of this compound were determined, and the processes of its dehydration and thermal decomposition were studied by chemical analysis, X-ray diffraction, IR spectroscopy, and thermography.