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1.
The steric energies of a number of the conformations of thymidine, derived from appropriate crystal structures, have been determined with the MM2 molecular mechanics force field. With one exception, these have very similar values which are close to 120 kJ mol–1. The C2-exo/C3-endo conformation has a far higher value of 240 kJ mol–1. The C3-endo conformation has previously been associated with thymidine derivatives which do not exhibit anti-HIV activity, and it may be that this is due to the relatively low predicted stability.  相似文献   

2.
The relative stabilities and molecular structures of the geometrical isomers of seven ,-dioxa derivatives of cycloalkylidenecycloalkanes with 3to 6-membered rings have been studied by DFT calculations at the B3LYP/6-31G* level of theory. In each case, the E form was calculated to have the lower total energy. The relative energy of the Z isomer proved to increase regularly with increasing sizes of the two heterocyclic rings, ranging from 1.1 to 13.8 kJ mol–1 on going from the 3,3to the 6,6-membered rings. Intermediate values of the relative energy were calculated for the Z forms of compounds containing two dissimilar rings. The relative energy of the Z isomer was found to be proportional to d –9.3, where d = the distance separating the two O atoms of the Z compound. The molecular structures, electric dipole moments, and atomic charges on the O atoms are also discussed.  相似文献   

3.
The kinetics of the interaction of adenosine 5-monophosphate (5-AMP) with cis-[Pt(en)(H2O)2]2+ have been studied spectrophotometrically as a function of [Pt(en)(H2O)2]2+, [5-AMP] and temperature at pH 4.0, where the substrate complex exists predominantly as the diaqua species. Both N1 and N7 donor sites of 5-AMP are active for coordination to Pt at this pH. Base stacking and metal-induced macrochelate formation of 5-AMP plays a vital role in determining the concentration limit of 5-AMP during kinetics. Substitution occurs in two consecutive steps; both dependent on the 5-AMP concentration. Activation parameters for both steps have been calculated. The low H 1 (42.76 ± 1.64 kJ mol–1) and large negative values of S 1 (–112.1 ± 5.1 J K–1 mol–1) as well as H 2 (58.1 ± 1.4 kJ mol–1) and S 2 (–84.2 ± 4.4 J K–1 mol–1) indicate associative modes of activation for both ligand substitution processes in the two consecutive steps.  相似文献   

4.
Bond strengths in RO-OOR, ROO-OH, and ROO-OOR (R, R = H, Me, Et, and Bu) molecules, calculated by the semiempirical quantum-chemical methods, were used to determine the enthalpies of formation of polyoxides RO x R (x = 3, 4) and related radicals and the bond strengths (D/kcal mol–1) in these molecules:D(ROOO-OR) = 33.2±0.9,D(ROOO-OH) = 37.5±0.7,D(R-O x R) = 76.0±1.2,D(H-000) = 58.6,D(R-000) = 42.8±0.8. A new value of Benson's polyoxide thermochemical increment, f H°[O-(O)2] = 11.1±1.0 kcal mol–1, was suggested.Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 9, pp. 2190–2193, September, 1996.  相似文献   

5.
Summary The vibrational spectra of solutions have been analyzed to assess both qualitatively and quantitatively the changes in enthalpy and entropy for ion pair formation in solutions of LiNCS, Mg(NCS)2, and LiN3 in liquid ammonia, dimethylformamide, dimethylsulphoxide and acetonitrile. Contrary to predictions both the H ass and S ass terms are all positive in the cases examined, indicating that the driving force in the ion association process derives from solvent-solute restructuring, and not the energy of the interaction between the cation and anion. This characteristic of contact ion pair formation is likely to be found to be applicable over a wide range of solvents. The following specific values of the thermodynamic parameters at 298 K have been obtained: LiNCS/DMF, G=–1.3 (1) kJ mol–1, H ass =+1.8 (5) kJ mol, S ass =+10 (2) J mol–1 K–1; LiNCS/DMSO, G=+0.9 (2) kJ mol–1, H ass =+0.3 (3) kJ mol–1; Mg(NCS)2/DMF, G ass =–4.0 (3) kJ mol–1, H ass =+15 (4) kJ mol–1, S=+64 (17) kJ mol–1; LiN3/DMSO, G ass =–2.5 (3) kJ mol–1, H ass =+4.9 (9) kJ mol–1, S ass =+25 (10) J K–1 mol–1.Submitted to celebrate the 70th Birthday of Professor Viktor Gutmann, and in recognition of his considerable contributions towards the better understanding of Chemistry in the Solution Phase  相似文献   

6.
Summary The structure of four new pyoverdins (Pf12-IA, -IIA, -IB und IIB) isolated from the culture medium ofPseudomonas fluorescens 12 was elucidated by combination of spectroscopic methods and degradation reactions. The pyoverdins comprise (1S)-5-amino-2,3-dihydro-8,9-dihydroxy-1H-pyrimido[1,2-a]quinoline-1-carboxylic acid whose amino group carries a 3-carboxypropanoyl-(IA), succinamoyl- (IIA), 4-carboxy-4-oxobutanoyl- (IB) or L-4-amino-4-carboxybutanoylresidue (II B) and whose carboxyl group is bound amidically to the N-terminus of D-Ser-L-Lys-Gly-. According to the short-hand-nomenclature suggested in [2, 3] the pyoverdins may be described as pyoverdin-Q-sKGOsSGK*oES*-SUC(IA), pyoverdin-Q-sKGOsSGK*o-ES*-SUCA (IIA), pyoverdin-Q-sKGOsSGK*oES*-KGL (IB) and pyoverdin-Q-sKGOsSGK*oES*-GLU (IIB). The pyoverdins described here possess the most complex structure encountered so far as their peptide part comprises eleven amino acids and the cyclo-tetrapeptide substructure. In addition, they are of special interest as for the first time glutamic acid could be identified as a chromophore side chain which is the key compound for the citric acid cycle to which belong all dicarboxylic acids found so far in pyoverdins.

Verwendete Abkürzungen ASK Acylseitenkette - Chr Chromophor1 a - (HO)Chr Chromophor1 b - Dns Dansyl-Rest - DP Dansylpeptid - EDTA Ethylendiamintetraessigsäure - FAB Fast Atom Bombardment (PI=positive Ionen) - (HO)Orn N5-Hydroxyornithin - (CHO, HO)Orn N5-Formyl-N5-hydroxyornithin - PITC Phenylisothiocyanat - RP-HPLC Reversed-Phase High Performance Liquid Chromatography - Kgl -Ketoglutarsäure bzw. 4-Carboxy-4-oxobutanoyl-Rest - R t Retentionszeit - Suc Bernsteinsäure bzw. 3-Carboxypropanoyl-Rest - Suca Succinamoyl-Rest - Suci Succinimido-Rest - TAB Trifluoracetyl-n-butylester - TEA Triethylamin  相似文献   

7.
The kinetics of oxidation of CoIIHEDTA {HEDTA = N-(2-hydroxyethyl)ethylenediamine-N,N,N-triacetic acid} by vanadate ion have been studied in aqueous acid in the pH range 0.75–5.4 at 43–57 °C. The reaction exhibits second-order kinetics; first-order in each of the reactants. The reaction rate is a maximum at pH = 2.1. A mechanism is proposed in which the species [CoIIHEDTA(H2O)] and VO2 + react to form an intermediate which decompose slowly to give pentadentate CoIIIHEDTA(H2O) and VIV as final products. The rate law was derived and the activation parameters calculated: H* = 26.96 kJ mol–1 and S* = –311.08 JK–1 mol–1.  相似文献   

8.
The x-ray crystal structures forcis,cis- andtrans,trans- 2,3-dimethyl-1-nitrocyclopropanecarboxylic acid, 2,2,3,3-tetramethyl-1-nitrocyclopro-panecarbonitrile, 2,2,3,3-tetramethyl-1-nitrocyclo-propanecarboxamide, andtrans,trans,trans,trans-2,2,3,3-tetramethyl-1,1-dinitrobicyclopropyl are reported. Contrary to expectations, -accepting groups that are syn to dimethyl substituents prefer a conformation perpendicular to the three-membered ring when there is an sp2 electron-withdrawing substituent also bonded to the same carbon atom. Ab initio calculations are reported for model compounds and these results are compared with the experimentally determined ones.  相似文献   

9.
Summary In an attempt to develop potential inhibitors ofUDP-glucuronosyltransferase, some 5-O-amino acid derivatives of uridine were synthesized. N-protectedL-amino acids were coupled at the 5-O-position of 2,3-O-isopropylideneuridine by esterification employing the method of symmetrical anhydrides in presence of 4-dimethylaminopyridine, 5-O-(N-benzyloxycarbonyl-O-tert.butyl-L-threonl)-23-O-isopropylideneuridine (1), 5-O-(N-tert.butyloxycarbonyl-O-benzyl-L-seryl)-2,3-O-isopropylideneuridine and (2), 5-O-(N-tert.butyloxycarbonyl-L-valyl)-2,3-O-isopropylideneuridine (3), and 5-O-(N-tert.butyloxycarbonyl-L-valyl)-2,3-O-isopropylideneuridine (4) were obtained in good yield after column chromatography on silica gel. The treatment of2 withTFA/CH2Cl2 (6:1) at room temperature for 30 min led to a selective removal of theBoc group without deblocking of the 2,3-O-isopropylidene group of uridine. Treatment of2 withTFA/H2O (5:1) at room temperature for 1 h, however, released bothBoc and 2,3-isopropylidene groups. TheZ group of1 was deprotected by catalytic hydrogenolysis over 10% Pd/C/ammonium formate.
Synthese von 5-O-Aminosäurederivaten des Uridins als potentielle Inhibitoren derUDP-Glukuronosyl-Transferase
Zusammenfassung In einem Versuch, potentielle Inhibitoren derUDP-Glukuronosyl-Transferase zu entwickeln, wurden einige 5-O-Aminosäurederivate des Uridins synthetisiert. N-GeschützteL-Aminosäuren wurden durch Veresterung mit der 5-O-Position des 2,3-isopropylidenuridins gekuppelt (Methode der symmetrischen Anhydride in der Gegenwart von 5-Dimethylaminopyridin). Solcherweise wurden 5-O-(N-Benzyloxycarbonyl-O-tert.butyl-L-threonly)-2,3-O-isopropylidenuridin (1), 5-O-(N-tert.Butyloxycarbonyl-O-benzyl-L-seryl)-2,3-O-isopropylidenuridin (2), 5-O-(N-tert.Butyloxycarbonyl-L-leucyl)-2,3-O-isopropylidenuridin (3) und 5-O-(N-tert.Butyloxycarbonyl-L-valyl)-2,3-O-isopropylidenuridine (4) nach Säulenchromatographie (Kieselgel) in guter Ausbeute hergestellt. Die Behandlung von2 mitTFA/CH2Cl2 (6:1) bei Zimmertemperatur (30 min) führte zu einer selektiven Abspaltung derBoc-Gruppe ohne Deblockierung der 2,3-O-Isopropylidengruppe des Uridins. Eine Behandlung von2 mitTFA/H2O (5:1) bei Zimmertemperatur für 1 Stunde führte hingegen zur Abspaltung sowohl derBoc als auch der 2,3-O-Isopropylidengruppe. DieZ-Gruppe von1 wurde durch katalytische Hydrogenolyse auf 10% Pd/C/Ammoniumformiat abgespalten.
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10.
Summary G2 theory is shown to be reliable for calculating isodesmic and homodesmotic stabilization energies (ISE and HSE, respectively) of benzene. G2 calculations give HSE and ISE values of 92.5 and 269.1 kJ mol–1 (298 K), respectively. These agree well with the experimental HSE and ISE values of 90.5±7.2 and 268.7±6.3 kJ mol–1, respectively. We conclude that basis set superposition error corrections to the enthalpies of the homodesmotic or isodesmic reactions are not necessary in calculations of the stabilization energies of benzene using G2 theory. The calculated values of the enthalpies of formation of such molecules containing multiple bonds such as benzene ands-trans 1,3-butadiene, which are found from the enthalpies of isodesmic and homodesmotic reactions rather than of atomization reactions, demonstrate good performance of G2 theory. Estimates of theH f o value for benzene from the G2 calculated enthalpies of homodesmotic reaction (2) and isodesmic reaction (3) are 80.9 and 82.5 kJ mol–1 (298 K), respectively. These are very close to the experimentalH f o value of 82.9±0.3 kJ mol–1. TheH f o value ofs-trans 1,3-butadiene calculated using the G2 enthalpy of isodesmic reaction (4) is 110.5 kJ mol–1 and is in excellent agreement with the experimentalH f o value of 110.0±1.1 kJ mol–1.  相似文献   

11.
The complex of [Tb2(p-MOBA)6(PHEN)2] (p-MOBA=C8H7O3,p-methoxybenzoate; PHEN=C12H8N2, 1,10-phenanthroline) was prepared and characterized by elemental analysis and IR spectroscopy. The thermal behavior of Tb2(p-MOBA)6(PHEN)2 in a static air atmosphere was investigated by TG-DTG, DTA, SEM and IR techniques. By the kinetic method of processing thermal analysis data put forward by Malek et al., it is defined that the kinetic model for the first-step thermal decomposition is SB(m,n). The activation energy E for this step reaction is 140.92 kJ mol-1, the enthalpy of activation H is 136.06 kJ mol-1, the Gibbs free energy of activation G is 145.16 kJ mol-1, the entropy of activation S is -15.53 J mol-1, and the pre-exponential factor lnA is 29.26. The lifetime equation at mass loss of 10% was deduced as ln =-28.72+1.943·104/T by isothermal thermogravimetric analysis.  相似文献   

12.
Summary 4-(1H-1,2,4-Triazolyl-3-azo)-2-methylresorcinol reacts with vanadium(V) at pH 8.10 (Tris-HClO4 buffer solution) to produce a pink-violet 11 complex ( max=525 nm,=2.55×104l·mol–1· cm–1) in a 50% (v/v) methanol-water medium, which allows the spectrophotometric determination of 0.1 to 1.51 ppm of vanadium. The method has been applied for the determination of the vanadium content in low alloy steels.
Spectrophotometriscbe Bestimmung von Vanadin mit 4-(1H-1,2,4-triazo-lyl-3-azo)-2-methylresorcin
Zusammenfassung Vanadin bildet bei pH 8,10 (Tris-HClO4-buffer) mit 4-(1H-1,2,4-tri-azolyl-3-azo)-2-methylresorcin ein rosenrot-violettes Chelat, dessen Absorptionsmaximum bei 525 nm in Gegenwart von 50% Methylalkohol gemessen wird. Dieser 11-Komplex entspricht bei einer Vanadin-Konzentration von 0,1–1,51g/ml dem Beerschen Gesetz; seine molare Absorptivität ist 2,55×104l·mol–1·cm–1. Das Verfahren wurde zur Bestimmung des Vanadins in Stahl verwendet.
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13.
Gas-phase reaction of acetylene with HgCl2 resulting in -chlorovinylmercury derivatives and their interaction with Cl and I anions and KI molecule was studied by the ab initio MP2 method with the Dunning—Hay double zeta basis set and LanL pseudopotential for Hg, K, and I atoms. The reaction was shown to proceed via a -complex of acetylene and HgCl2 (the calculated enthalpy of formation is –6.5 kcal mol–1). According to calculations, the activation energy of formation of cis--chlorovinylmercury chloride from acetylene and HgCl2 is 31 kcal mol–1. Chloride and iodide anions and KI molecule are readily added to both cis- and trans-isomer of -chlorovinylmercury chloride to give stable species.  相似文献   

14.
Summary. ESR and ENDOR spectra are reported of several symmetrical substituted N,N,N,N-tetraalkyl-p-phenylenediamine radical cations in solution. Different N,N-alkyl substituted para-phenylenediamines, like the ethyl, n-propyl, and iso-propyl derivative are compared with the parent N,N,N,N-tetramethyl-p-phenylenediamine (Wursters Blue Cation). N,N,N,N-Tetrabenzyl-p-phenylenediamine, 1,4-dipyrrolidinylbenzene, and N,N-bis[4-(dimethylamino)phenyl]piperazine are additionally investigated. Experimental and calculated hyperfine coupling constants are compared. Characteristic UV-VIS data and redox potentials in acetonitrile are reported, together with the syntheses of the compounds.  相似文献   

15.
Summary The kinetics of aqua ligand substitution fromcis-[Coen2(H2O)2]3+ by quinolinic acid have been studied spectrophotometrically in the 40 to 55°C range. At pH 4.05 the quinolinic acid H2Quin behaves as uninegative and bidentate (O, O) donor. The replacement of water was found to involve two consecutive step processes. The first is the replacement of one water fromcis-[Coen2(H2O)2]3+ by unidentate HQuin, involving prior establishment of an ion-pairing associative equilibrium, followed by dissociative interchange. The second step is the slower chelation step, where another water molecule is replaced. The rate constants for both the steps and the ion-pair equilibrium constant for the first step have been evaluated. The activation parameters for the two steps are: H 1 =117.2 kJ mol–1, H 2 =100.5 kJ mol–1 and S 1 =69.4 JK–1 mol–1, S 2 =12.1 JK–1 mol–1. A probable mechanism for the substitution process is suggested.  相似文献   

16.
Starting from (+) (2R) methyl 5-ethyl-2,2-spirobiindane-5-carboxylate of known enantiomeric purity 79 optically active, configurationally correlated 5,5,6-trisubstituted 2,2-spirobiindanes (2–7) were prepared for the purpose of testing a shortened polynomal Ansatz for chirality functions. Their optical rotations and1H-nmr spectra are reported.In this context several 6-substituted 5-ethylindanes (1) were prepared as model compounds for synthetic transformations.
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17.
Summary [2E,7E]-4,9-dioxo-2,7-decadienoic, [2E,7E]-9-oxo-2,7-decadienoic and [2Z,4E]-2-methyl-2,4-hexadienoic acids were isolated from the filtrate ofPenicillium vermiculatum Dang. The presence of [2E,2E,7S,7E]-4,9-dioxo-7-(4,9-dioxo-2,7-decadienoyloxy)-2-decenoic acid was confirmed by chromatography. HPLC was used for the determination of these acids in the cultivation medium.
Identifizierung und Bestimmung von organischen Säuren im Kultivierungsmedium vonPenicillium vermiculatum Dang
Zusammenfassung [2E,7E]-4,9-dioxo-2,7-decadiensäure, [2E,7E]-9-oxo-2,7-decadiensäure und [2Z,4E]-2-methyl-2,4-hexa-diensäure wurden aus dem Kultivierungsmedium vonPenicillium vermiculatum Dang isoliert. Die Anwesenheit von [2E,2E,7S,7E]-4,9-dioxo-7-(4,9-dioxo-2,7-decadienoyloxy)-2-decensäure wurde chromatographisch bestätigt, Im Filtrat vonP. vermiculatum wurden diese Säuren mittels HPLC analysiert.
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18.
Temperature dependence was studied for relative quantum yields of emission from some exciplexes of pyrene, 1,12-benzoperylene, and 9-cyanoanthracene with methoxybenzenes or methylnaphthalenes in solvents of different polarity (ranging from toluene to acetonitrile). The enthalpy H Ex *, the entropy S Ex *, and the Gibbs free energy G Ex *of formation of the exciplexes were determined. Depending of the Gibbs free energy of excited-state electron transfer (G et *) and solvent polarity, the values of H Ex *, S Ex *, and G Ex *vary over the ranges from –5 to –40 kJ mol–1, from +3 to –90 J mol–1K–1, and from +3 to –21 kJ mol–1, respectively. The possibility is discussed that the effect of solvent polarity G et *on the exciplex formation enthalpies can be rationalized in terms of the model of correlated polarization of an exciplex and the medium.  相似文献   

19.
Summary The energy barrier to helix inversion in biliverdin is doubled if the pyrrolinone rings are bonded by a four-link chain as present in the chiral diastereoisomers of 2,18-(1,4-dimethoxybutane-1,4-diyl)-8,12-bis(2-methoxycarbonylethyl)-3,7,13,17-tetramethyl-1,19-(21H,24H)-bilindion1 and its hydroxy derivative2. The torsional restrictions thus imposed on the bilatriene moiety provide the basis for resolution by first-order asymmetric transformation with optically active mandelic acid. Interconversion barriers at 293 K range from 85 to 90 kJ mol–1 and were determined monitoring the rate of isomerization processes (M-RR)-1 b(P-RR)-1 a, (P-SS)-1 b(M-SS)-1 a, and the racemization process (P-RS)-1 c(M-RS)-1 c by c.d. spectroscopy. Similar results were obtained with the bridged biliverdins2.
Behinderung der Helix-Interkonversion in 2,18-überbrückten Biliverdinen
Zusammenfassung Die Energiebarriere für die Helixinversion von Biliverdinen läßt sich durch Überbrücken der Pyrrolinonringe mit einer C-4 Einheit auf das Doppelte erhöhen. Derartige Verhältnisse liegen in den chiralen Diastereomeren des 2,18-(1,4-Dimethoxybutan-1,4-diyl)-8,12-bis(2-methoxycarbonylethyl)-3,7,13,17-tetramethyl-1,19-(21H,24H)-bilindions1 und seines Hydroxyabkömmlings2 vor. Die dadurch bedingten Torsionsrestriktionen im Bilatrienteil stellen die Grundlage für eine Spaltung durch asymmetrische Umwandlung erster Art mit optisch aktiver Mandelsäure dar. Die Barrieren liegen zwischen 85 und 90 kJ mol–1 (293 K) und wurden aus der Geschwindigkeit der Isomerisierungsprozesse (M-RR)-1 b(P-RR)-1 a, (P-SS)-1 b(M-SS)-1 a, sowie des Razemisierungsprozesses (P-RS)-1 c(M-RS)-1 c mittels Circulardichroismus bestimmt. Ähnliche Ergebnisse wurden für die Isomeren von2 erhalten.
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20.
The geometry optimized structures and total energies of 3-substituted (R) 2,5-dihydrofurans (a) and their isomers, 4-substituted 2,3-dihydrofurans (b), have been determined by ab initio calculations at the MP2/6-31G*//HF/6-31G* level. The nature of the moiety R has a marked effect on the relative total energies of the isomeric forms: at the calculation level cited, the reaction enthalpies for the a b isomerization range from +4.7 kJ mol–1 for R = MeO to –30.5 kJ mol–1 for both R = COOMe and R = NO2. The reaction enthalpies appear to be controlled by the electronic effect of R on the strength of p- conjugation in b. The a isomer has a planar ring, independent of R (excluding NH2), whereas the planarity of b depends on the electronic nature of R: the 2,3-dihydrofuran ring is planar for both R = COOMe and R = NO2, but nonplanar for less conjugation-enhancing substituents.  相似文献   

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