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氢化酶仿生化学是当前有机金属化学领域研究的前沿课题,其主要内容为针对氢化酶的活性中心结构和功能进行化学模拟研究.自然界中已经发现的氢化酶有三种,其中[NiFe]氢化酶、[FeFe]氢化酶研究较多.单铁氢化酶发现于1990年,是产甲烷杆菌在厌氧和镍缺乏的条件下合成的.区别于其他两种氢化酶,其活性中心不含Fe-S簇,且仅含有一个Fe原子,并且仅能在底物存在的情况下,催化异裂氢分子并选择性还原特定底物,为产甲烷杆菌代谢提供能量.研究单铁氢化酶的结构和功能,模拟其活化氢、利用氢的过程,对于探索清洁能源的利用和开发新的非贵金属催化剂具有重要意义.本文以单铁氢化酶(Hmd)结构和功能模拟为导向,针对单铁氢化酶一级配位结构,设计合成了两个新模型化合物.通过IR, NMR, X射线单晶衍射等手段表征分析了模型化合物的性质并确认其结构.探索了其质子化反应特性、电催化还原质子制氢的特性.为了进一步模拟Hmd催化裂解氢气、完成氢转移的功能,以所合成模型物为催化剂实现了在常温常压下,以乙醇作为质子源的催化转移氢化过程.新单铁模型配合物Fe(CO)2PR3(NN)(R = Cy (3), Ph (4), NN,邻苯二胺二价阴离子配体)由NN二齿配体与前体化合物Fe(CO)3I2PR3进行配体取代反应合成.模型化合物活性中心为一个二价铁原子,拥有两个处于cis-位置的羰基配体,一个邻苯二胺双齿配体(两个氮原子进行配位)以及一个有机膦配体.通过红外光谱表征所合成的具有不饱和五配位结构化合物的光谱性质,可以得到配合物Fe(CO)2PCy3(NN)的羰基红外特征谱峰为1974,1919 cm–1,配合物Fe(CO)2PPh3(NN)的红外特征谱峰在1985和1929 cm–1处.通过单晶X射线衍射表征确认了两个化合物结构,并获取晶体学数据.经研究发现, Fe(CO)2PR3(NN)能够发生酸碱调控下可逆的质子化/脱质子化过程.基于红外光谱和密度泛函理论计算推断邻苯二胺阴离子配体可以作为内部碱基.在酸性条件下, Fe(CO)2PR3(NN)分子内部碱基氮原子通过质子化反应结合一个质子,生成Fe(CO)2PR3(NN)·H+.加入碱之后,重新生成起始化合物Fe(CO)2PR3(NN).表明N原子作为内部碱基,具有结合和转移质子的能力.该性质与Hmd中半胱氨酸硫配体具有一致性.通过循环伏安曲线研究了配合物Fe(CO)2PCy3(NN)和Fe(CO)2PPh3(NN)的电化学性质.其中配合物Fe(CO)2PCy3(NN)和Fe(CO)2PPh3(NN)均具有两个不可逆的还原峰和氧化峰.在电化学制氢研究中,配合物Fe(CO)2PPh3(NN)的还原峰电流随着乙酸的加入增幅较大,展现出较强的催化质子还原的性质.通过与其他单铁模型配合物对比,可以推断第一个还原峰归属为配合物由FeI转化为FeI,第二个可逆还原峰归属为配合物由FeI转化为Fe0.同时,配合物Fe(CO)2PPh3(NN)第一个还原峰向高电位移动,该现象与双铁模型化合物的电化学性质较为一致.进一步研究发现,模型化合物具有催化转移氢化的活性.在常温下,乙醇溶剂中, Fe(CO)2PCy3(NN)能够催化对苯醌还原转化为对苯二酚,其中对苯醌的转化率达到89%,对苯二酚的产率达到40%.结合实验数据以及文献资料分析,认为乙醇在催化氢化中可以作为质子源,并且提出了催化转移氢化反应过程的机理.认为催化氢化过程中形成了-Fe-H-C-O-H-N-六元环,通过分子间相互作用完成了氢原子转移过程.该研究结论对单铁氢化酶活性中心模型化合物在催化氢化反应中的应用具有一定的参考价值. 相似文献
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优化得到了碱基腺嘌呤、胸腺嘧啶、尿嘧啶、鸟嘌呤及胞嘧啶与甘氨酸二肽分子形成的28个氢键复合物的稳定结构并计算了结合能, 探讨了五种碱基与甘氨酸二肽分子间氢键作用的最佳位点. 本文研究发现: 每种碱基均可以通过不同位点与二肽分子形成氢键复合物, 腺嘌呤、胸腺嘧啶、尿嘧啶、鸟嘌呤及胞嘧啶分别最倾向使用A3、T1、U1、G3及C1位点与甘氨酸二肽分子形成氢键复合物; 碱基分子某位点的质子化反应焓变越负所形成的氢键复合物越稳定, 去质子化反应焓变越小所形成的氢键复合物越稳定; 由氢键复合物的结合能计算得到的稳定性次序与由碱基分子质子化和去质子化反应焓变推得的稳定性次序一致. 相似文献
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研究表面活性剂分子在水溶液中的聚集行为对模拟生物膜功能和研究分子间相互作用具有重要意义"'.用于形成囊泡双分子层的表面活性剂主要是类似天然磷脂的双烷基链两亲分子,单烷基链两亲分子在引人刚性基团时亦可形成双分子膜k'.含SChiff碱基两亲分子在水溶液中的聚集性质及间、尾链长度对SChiff碱基构象的影响已有报道"'.本文报道了这类分子的另一种重要成膜性质,即改变制备条件,可选择性地得到不同聚集结构和相变温度的双分子膜·实验中所用成膜分子为:CH。(CH。)。;OPh-N-CH-PhO(CH;)n;N"(CH。)。Br-(m-4;n-… 相似文献
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一种新的不对称Schiff碱与稀土配合物合成机理及波谱 总被引:8,自引:1,他引:7
采用一种新途径 ,利用反应物前体 2 ,6 二氨基己酸 (赖氨酸 )两端具有不对称结构的—NH2 基 ,成功地合成了一端与水杨醛 ,另一端与邻香草醛缩合形成的新型不对称双Schiff碱 .为与通常不对称Schiff碱区别起见 ,称之为“异双Schiff碱” .提出了这类Schiff碱及配合物的合成方法 ,并以此分别合成了包括钇的 1 2种稀土不对称Schiff碱新配合物 .对它们作了元素分析、摩尔电导、红外光谱 ,特别是1H与13 CNMR等表征 ,并研究和讨论了这类不对称Schiff碱分步缩合反应及其形成机理与稀土离子配位方式 .为合成类似不对称Schiff碱与配合物提供了一种新方法 . 相似文献
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以实验合成出的Schiff碱配体和Co(II)配合物为母体,设计了Schiff碱配体和具有三维结构的Co(II)配合物.采用密度泛函理论的B3LYP/6-31g(d)-FF方法对具有开壳层电子组态Co(II)配合物及相应配体的二阶非线性光学(NLO)效应进行了计算.结果表明:Schiff碱配体形成配合物后分子的二阶NLO性质没有发生大的改变,这是由于金属Co2 离子在配合物电荷转移(CT)过程中起到了桥的作用,对分子的二阶NLO响应直接贡献不大.结合配合物的前线分子轨道分析发现,在分子内电荷转移过程中,对分子二阶NLO系数的主要贡献是配体内电荷转移(ILCT)跃迁. 相似文献
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The regeneration of bovine rhodopsin from its apoprotein opsin and the prosthetic group 11-cis retinal involves the formation of a retinylidene Schiff base with the epsilon-amino group of the active lysine residue of opsin. The pH dependence of a Schiff base formation in solution follows a typical bell-shaped profile because of the pH dependence of the formation and the following dehydration of a 1-aminoethanol intermediate. Unexpectedly, however, we find that the formation of rhodopsin from 11-cis retinal and opsin does not depend on pH over a wide pH range. These results are interpreted by the Matsumoto and Yoshizawa (Nature 258 [1975] 523) model of rhodopsin regeneration in which the 11-cis retinal chromophore binds first to opsin through the beta-ionone ring, followed by the slow formation of the retinylidene Schiff base in a restricted space. We find the second-order rate constant of the rhodopsin formation is 6100+/-300 mol(-1) s(-1) at 25 degrees C over the pH range 5-10. The second-order rate constant is much greater than that of a model Schiff base in solution by a factor of more than 10(7). A previous report by Pajares and Rando (J Biol Chem 264 [1989] 6804) suggests that the lysyl epsilon-NH(2) group of opsin is protonated when the beta-ionone ring binding site is unoccupied. The acceleration of the Schiff base formation in rhodopsin is explained by stabilization of the deprotonated form of the lysyl epsilon-NH(2) group which might be induced when the beta-ionone ring binding site is occupied through the noncovalent binding of 11-cis retinal to opsin at the initial stage of rhodopsin regeneration, followed by the proximity and orientation effect rendered by the formation of noncovalent 11-cis retinal-opsin complex. 相似文献
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Timothy C. Corcoran Paul Dupuis † M. A. El-Sayed 《Photochemistry and photobiology》1986,43(6):655-660
Abstract— The deprotonation kinetics of tyrosine and the protonated Schiff base during the bacteriorho-dopsin photocycle were studied under different perturbations by transient absorption spectroscop Native purple membrane, as well as samples which were deionized (blue) then restored with Na+ or La3+ were used at pH's ranging from 7 to 10 at very low salt concentrations. The results were compared with previous studies at higher ionic strength. The important conclusions can be summarized as follows: (a) The rate constants of both the Schiff base and tyrosine deprotonation are not very sensitive to the changes of conditions. (b) An almost linear relationship is observed between the relative amplitudes of the tyrosine deprotonated during the cycle and the slow component of the Schiff base deprotonation under the different perturbations studied. This was taken to support the two site model for the protonated Schiff base, one near tyrosine and the other near its ionized form. (c) The pKa value determined from the ratio of the amplitude of the fast to the slow component of the Schiff base deprotonation is found to decrease with increasing ionic strength of the medium. At extremely low ionic strength, it was found to equal that of the tyrosine phenolic group in solution. 相似文献
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将4种氮杂冠醚取代的双Schiff碱钴(H)、锰(m)配合物作为仿水解酶模型催化羧酸酯(PNPP)水解.考察了Schiff碱配合物中氮杂冠醚取代的位置、氮杂冠醚的数目对其仿水解酶性能的影响;探讨了Schiff配合物催化PNPP水解的动力学和机理;提出了配合物催化PNPP水解的动力学模型.结果表明,在25℃条件下随着缓冲溶液pH值的增大,配合物催化PNPP水解速率提高;四种氮杂冠醚取代的双Schiff碱配合物在催化PNPP水解反应中表现出良好的催化活性;氮杂冠醚3-取代的Schiff碱配合物CoL2的催化活性高于5-取代的Schiff碱配合物CoL1,含有2个氮杂冠醚的配合物CoL3的催化活性高于含有1个氮杂冠醚的配合物CoL2. 相似文献
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Abstract— The pKa of the Schiff base of N-retinylidene butylamine was determined in anionic (sodium dodecylsulfate), cationic (cetyltrimethylammonium bromide) and nonionic (polyoxyethylene (9) lauryl ether) detergent solutions. The pKa of the Schiff base was raised from 6.4 to 9.9 by the effect of the neighboring anion. The rise of the pKa was affected by the ion strength. Squid metarhodopsin behaved in a manner similar to the model Schiff base in the anionic detergent solution. The cationic group showed the opposite effect on the pKa of the Schiff base. The retinal Schiff base in rhodopsin might be heavily influenced by adjacent anionic groups. The nature of the interaction is discussed. 相似文献
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László Zimányi Man Chang Baofu Ni Richard Needleman Janos K. Lanyi † 《Photochemistry and photobiology》1992,56(6):1049-1055
The photocycle of the proton pump bacteriorhodopsin contains two consecutive intermediates in which the retinal Schiff base is unprotonated; the reaction between these states, termed M1 and M2, was suggested to be the switch in the proton transport which reorients the Schiff base from D85 on the extracellular side to D96 on the cytoplasmic side (Váró and Lanyi, Biochemistry 30, 5016-5022, 1991). At pH 10 the absorption maxima of both M1 and M2 could be determined in the recombinant D96N protein. We find that M1 absorbs at 411 nm as do M1 and M2 in wild-type bacteriorhodopsin, but M2 absorbs at 404 nm. Thus, in M2 but not M1 the unprotonated Schiff base is affected by the D96N residue replacement. The connectivity of the Schiff base to D96 in the detected M2 state, but not in M1, is thereby established. On the other hand, the photostationary state which develops during illumination of D85N bacteriorhodopsin contains an M state corresponding to M1 with an absorption maximum shifted to 400 nm, suggesting that this species in turn is affected by D85. These results are consistent with the suggestion that M1 and M2 are pre-switch and post-switch states, respectively. 相似文献
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The epoxy resins containing imine bonding were prepared from hydroxyl substituted Schiff base monomers in two steps. At the first step, hydroxyl substituted Schiff base monomers were synthesized via condensation reaction. At the second step, epoxy resins were synthesized from the reaction between Schiff base monomers and epichlorohydrine (EPC). Then curing processes of epoxy resins were achieved by p-phenylenediamine compound. The structures of resulting compounds were confirmed by FT-IR, UV-Vis and 1H-NMR. TG-DTA and DSC measurements were performed for thermal characterizations of the compounds. Chemical resistances of the cured epoxy-amine systems were determined for coating applications in acidic, alkaline and organic solvents. HCl (10%, aqueous solution), NaOH (10%, aqueous solution), DMSO, DMF, N-methylpyrrolidone, ethanol, THF and acetone were used for corrosion tests. Chemical resistance data of the synthesized epoxy resins demonstrated that they have good chemical resistance against various acid, alkaline and common organic solvents. Surface morphologies of epoxy resin and the cured epoxy resin were determined with scanning electron microscopy (SEM) measurements. Also, optical band gap (Eg) values of Schiff base monomers and epoxy resins were calculated from UV-Vis measurements. 相似文献
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Yasushi Koyama Keishi Kubo Mika Komori Haruo Yasuda Yumiko Mukai 《Photochemistry and photobiology》1991,54(3):433-443
Alumina adsorption chromatography and ion-pair reversed-phase chromatography were developed to analyze the isomers of unprotonated and protonated n-butylamine Schiff base of retinal (RSB and PRSB), respectively. Photoisomerization starting from the all-trans, 11-cis and 13-cis isomers was traced for RSB in n-hexane, acetonitrile, methanol and 1-butanol, and for PRSB in methanol, acetonitrile and 1-butanol. The quantum yields of photoisomerization for the all-trans, 9-cis, 11-cis and 13-cis isomers were determined for RSB and PRSB in the above solvents except 1-butanol. On the other hand, photoisomerization of isomeric retinal bound (through Schiff base linkage) to bovine serum albumin (RBSA) in aqueous solution (pH 3, 7 and 12) as well as thermal isomerization of RSB (in n-hexane), PRSB (in methanol) and RBSA (in aqueous solution, pH 7) were traced starting from the all-trans, 11-cis, and 13-cis isomers. Protonation of RSB drastically changes the pathway of photoisomerization and increases the quantum yields of isomeric RSB. The solvent polarity increases the quantum yields of RSB differently depending on the configuration. Protonation enhances thermal isomerization also. The results of the above model systems are compared with those of retinal proteins to rationalize their selection of the particular isomerization pathways. 相似文献
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Paul Kolodner Evgeniy P. Lukashev Yuan-chin Ching I. Rousso M. Sheves 《Photochemistry and photobiology》1999,70(1):103-110
Abstract— We report the results of experiments on the application of electric fields across thin, dry Alms of a bacteriorho-dopsin (BR) analog pigment in which the retinal chro-mophore has been replaced with 13-demethyl-11,14-epoxyretinal. As previously observed in other BR variants with low Schiff-base pK values, this pigment exhibits protonation and deprotonation of the Schiff base under an applied electric field, depending on the initial Schiff-base protonation state or effective pH. At low effective pH, a fast (<200 μs) deprotonation reaction dominates. At high pH, an apparently different mechanism leads to Schiff-base protonation on the time scale of seconds. Comparison of our results with a simple model suggests that the external field causes a shift in the pK of the Schiff base by1–2 pH units. 相似文献