Three different fluorescent responses to transition metal ions using receptors based on 1,2-bis- and 1,2,4,5-tetrakis-(8-hydroxyquinolinoxymethyl)benzene

The dipod 1,2-bis(8-hydroxyquinolinoxymethyl)benzene (3) and tetrapod 1,2,4,5-tetrakis(8-hydroxyquinolinoxymethyl)benzene (5) have been synthesized through nucleophilic substitution of respective 1,2-bis(bromomethyl)benzene (2) and 1,2,4,5-tetra(bromomethyl)benzene (4) with 8-hydroxyquinoline (1). For comparison, 1,3,5-tris(8-hydroxyquinolinoxymethyl)benzene derivatives (7a and 7b) have been obtained. The complexation behavior of these podands towards Ag⁺, Co²⁺, Ni²⁺, Cu²⁺, Zn²⁺, and Cd²⁺ metal ions has been investigated in acetonitrile by fluorescence spectroscopy. The sterically crowded 1,2,4,5-tetrapod 5 displays unique fluorescence ‘ON-OFF-ON’ switching through fluorescence quenching (λ_max 395 nm, switch OFF) with <1.0 equiv of Ag⁺ and fluorescence enhancement (λ_max 495 nm, switch ON) with >3 equiv Ag⁺ and can be used for estimation of two different concentrations of Ag⁺ at two different wavelengths. The addition of Cu²⁺, Ni²⁺, and Co²⁺ metal ions to tetrapod 5 causes fluorescence quenching, i.e., ‘ON-OFF’ phenomena at λ_max 395 nm for <10 μM (1 equiv) of these ions but addition of Zn²⁺ and Cd²⁺ to tetrapod 5 results in fluorescence enhancement with a gradual shift of λ_em from 395 to 432 and 418 nm, respectively. Similarly, dipod 3 behaves as an ‘ON-OFF-ON’ switch with Ag⁺, an ‘ON-OFF’ switch with Cu²⁺, and an ‘OFF-ON’ switch with Zn²⁺. The placement of quinolinoxymethyl groups at the 1,3,5-positions of benzene ring in tripod 7a-b leads to simultaneous fluorescence quenching at λ_max 380 nm and enhancement at λ_max 490 nm with both Ag⁺ and Cu²⁺. This behavior is in parallel with 8-methoxyquinoline 8. The rationalization of these results in terms of metal ion coordination and protonation of podands shows that 1,2 placement of quinoline units in tetrapod 5 and dipod 3 causes three different fluorescent responses, i.e., ‘ON-OFF-ON’, ‘ON-OFF’, and ‘OFF-ON’ due to metal ion coordination of different transition metal ions and 1, 3, and 5 placement of three quinolines in tripod 7, the protonation of quinolines is preferred over metal ion coordination. In general, the greater number of quinoline units coordinated per metal ion in 5 compared with the other podands points to organization of the four quinoline moieties around metal ions in the case of 5.     

Spectrokinetic studies on new bi-photochromic molecules containing two naphthopyran entities

A range of new bi-photochromic molecules containing two identical (3a-d) or two distinct naphthopyran units (6a-d), linked through the phenyl substituents located on the sp³ hybridised pyran ring carbon atom, using conjugated and non-conjugated spacers, have been synthesised from bis-propynols and (substituted)naphthols. Study of the spectrokinetic properties of these compounds under near UV-vis continuous irradiation conditions revealed that the two naphthopyran units are stimulated independently leading to open forms with higher colourabilities but without affecting the individual bleaching kinetics. Compared to the individual photochromic components and to model mono-photochromes it was observed that the nature of the bridge has a small effect on the photochromic properties of each system.     

A turn-on Schiff base fluorescence sensor for zinc ion

A simple Schiff base type fluorescent receptor 1 was prepared and evaluated for its fluorescence response to heavy metal ions. Receptor 1 exhibits an ‘off-on-type’ mode with high selectivity in the presence of Zn²⁺ ion. The selectivity of 1 for Zn²⁺ is the consequence of combined effects of chelation-enhanced fluorescence (CHEF), CN isomerization, and inhibition of photoinduced electron transfer (PET).     

Highly selective fluorescent chemosensors for cadmium in water

The design, synthesis and photophysical evaluation of two new chemosensors 1 and 2 is described for the selective detection of Cd(II) in water at pH 7.4. Both are based on the use of aromatic iminodiacetate receptors that connected to an anthracene fluorophore by covalent methyl spacers. These are highly water-soluble sensors where the fluorescence is ‘switched off’ between pH 3-11, due to photoinduced electron transfer (PET) quenching of the anthracene excited state by the receptor. Upon protonation of the receptor, the emission was however, ‘switched on’. From these changes pK_as of 1.8 and 2.5 were determined for 1 and 2 respectively. Both showed good selectivity for Cd(II) over competitive ions such as group II and Zn(II), Cu(II), Co(II). For 1, having a single receptor, only a weak monomer anthracene emission was observed for the free sensor at pH 7.4 (HEPES buffer, 135 mM NaCl). Upon Zn(II) titration, a broad red shifted emission occurred, centred at 468 nm. In the presence of Cd(II), a similar red shifted emission was also observed, however, this time centred at 506 nm. In contrast to these results, the fluorescence of 2 in the presence of Zn(II) gave rise to typical monomeric anthracene emission, due to suppression of PET, that is, the anthracene emission was ‘switched on’. Nevertheless, in the presence of Cd(II) a broad emission centred at 500 nm was observed, similar to that seen for 1. These ion induced long wavelength emission bands were assigned to the formation of charge-transfer complexes (exciplexes) between the anthracene moieties and the ion-receptor complexes. Importantly, for both 1 and 2, a selective detection of Cd(II) was possible, even in the presence of Zn(II).     

A logic gate-based fluorogenic probe for Hg detection and its applications in cellular imaging

A new colorimetric and fluorogenic probe (RN₃) based on rhodamine-B has been successfully designed and synthesized. It displays a selective response to Hg²⁺ in the aqueous buffer solution over the other competing metals. Upon addition of Hg²⁺, the solution of RN₃ exhibits a ‘naked eye’ observable color change from colorless to red and an intensive fluorescence with about 105-fold enhancement. The changes in the color and fluorescence are ascribed to the ring-opening of spirolactam in rhodamine fluorophore, which is induced by a binding of the constructed receptor to Hg²⁺ with the association and dissociation constants of 0.22 × 10⁵ M⁻¹ and 25.2 μM, respectively. The Job's plot experiment determines a 1:1 binding stoichiometry between RN₃ and Hg²⁺. The resultant “turn-on” fluorescence in buffer solution, allows the application of a method to determine Hg²⁺ levels in the range of 4.0–15.0 μM, with the limit of detection (LOD) calculated at 60.7 nM (3σ/slope). In addition, the fluorescence ‘turn-off’ and color ‘fading-out’ happen to the mixture of RN₃-Hg²⁺ by further addition of I⁻ or S²⁻. The reversible switching cycles of fluorescence intensity upon alternate additions of Hg²⁺ and S²⁻ demonstrate that RN₃ can perform as an INHIBIT logic gate. Furthermore, the potential of RN₃ as a fluorescent probe has been demonstrated for cellular imaging.     

Highly stable and fluorescent switching spirooxazines

Two novel photochromic spirooxazines, SO-NA1 and SO-NA2, containing a naphthalimide unit were synthesized. The imide group of naphthalimide unit is incorporated at the naphthoxazine fragment, thus giving strong electron-withdrawing effect favoring the long-lived merocyanine (MC) in the dark giving good colorability in solution. Remarkably, their open merocyanine (MC) forms exhibit significantly long lifetimes, almost three magnitudes longer than that of unsubstituted spironaphthoxazine (1). Moreover, the fluorescence of naphthalimide unit can be switched on and off by photoinduced conversion between the open and closed forms.     

Optically active imidazoles derived from enantiomerically pure trans-1,2-diaminocyclohexane

A new exploration of monoprotected derivatives of trans-1,2-diaminocyclohexane as a platform for the synthesis of enantiomerically pure imidazole derivatives is described. The primary amino group (-NH₂), present in the mono-imine derivative of salicylic aldehyde (hemi-salen derivative) 5 was used for sequential reactions with formaldehyde and the corresponding α-(hydroxyimino)ketone. (S)-(−)-1-Phenylethylamine was also used as starting material for the preparation of new imidazole N-oxides 7c and 10a-c, bearing a chiral N-(1-phenylethyl)carboxamido function at C(4). Imidazole N-oxides 10a,b possessing either a Me or i-Pr group at N(1), respectively, follow the known sulfur-transfer pathway to afford the corresponding imidazole-2-thiones 13a,b. However, in the case of imidazole N-oxide 10c with a bulky adamantan-1-yl substituent at N(1), the attempted ‘sulfur-transfer reaction’ led to the deoxygenated imidazole derivative 14. Finally, the same reaction with 7c, which bears an electron-withdrawing N-(1-phenylethyl)carboxamide residue at C(4) of the imidazole ring, yielded a mixture of deoxygenated imidazole 16 and imidazole-2-thione 15c.     

A highly selective fluorescent chemosensor for silver(I) in water/ethanol mixture

Synthesis, photophysical, and complexation properties of fluorescent chemosensors, L¹ and L², with ‘receptor-spacer-fluorophore’ motif (L¹: NS₂O₂-cyclic receptor, L²: acyclic analogue receptor) are described. Maximum chelation-enhanced fluorescence effect (TURN-ON type) was observed in the presence of Ag⁺ for both fluoroionophores in a 1:1 (v/v) aqueous ethanol solution: remarkably superior selectivity of L¹ (150-fold) with cyclic receptor than that of the L² (50-fold) with acyclic analogue was found. According to the fluorescence and NMR titrations, the excellent selectivity of L¹ is attributed to its topology-based higher affinity in complexation.     

Synthesis and ‘double click’ density functionalization of 8-aza-7-deazaguanine DNA bearing branched side chains with terminal triple bonds

The 7-[di(prop-2-ynl)amino]prop-1-ynyl derivative of 8-aza-7-deaza-2′-deoxyguanosine (1) was synthesized from 7-iodo-8-aza-7-deaza-2′-deoxyguanosine (7) by Sonogashira cross-coupling and converted into the phosphoramidite building block 10. Oligonucleotides bearing branched side chains with terminal triple bonds were prepared by solid-phase synthesis containing single or multiple residues of 1 as 2′-deoxyguanosine surrogates. T_m measurements demonstrate that compound 1 has a positive effect on duplex stability, which is comparable to the stabilizing effect of the octa-1,7-diynylated non-branched nucleoside 2. Nucleoside 1 and corresponding oligonucleotides were functionalized by the Cu(I)-mediated 1,3-dipolar cycloaddition ‘double click’ reaction with diverse ligands (AZT 3, benzyl azide 4, 11-azidoundecanol 5 and m-dPEG™₄-azide 6). The conjugation reactions were carried out in solution and on solid support. Nucleoside 1 allowed ‘double’ functionalization of a single residue with two reporter groups. The ‘double click’ reaction proceeded smoothly even when two residues of nucleoside 1 were arranged in proximal positions. Hybridization with complementary strands led to a stable oligonucleotide duplex. Molecular modeling indicates that inspite of the crowded steric situation with four AZT ligands within closest proximal positions, all ligands are well accommodated in the major groove not disturbing the DNA helix.     

A unique ‘ON-OFF-ON’ switch with two perturbations at two different concentrations of Ag

The dipod 1,2-bis(8-quinolinoxymethyl)benzene 3 and tetrapod 1,2,4,5-tetrakis(8-quinolinoxymethyl)benzene 4 show two perturbations in fluorescence with Ag⁺, (i) fluorescence quenching with <1.0 equiv of AgNO₃ at λ_max 395 nm and (ii) fluorescence enhancement at λ_max 500 nm with >3 equiv of AgNO₃. This ‘ON-OFF-ON’ switching of 3 and 4 in comparison with simultaneous fluorescence quenching and enhancement in the case of 8-methoxyquinoline 1 and the tripod 1,3,5-trimethyl-2,4,6-tris(8-quinolinoxymethyl)benzene 2 point to the unique role of molecular architectures arising due to the number and spatial positions of quinoline units in the fluorescence behaviour of an 8-alkoxyquinoline moiety towards Ag⁺.     

Chiral β-diketonate ligands of ‘pseudo planar chiral’ topology: enantioselective synthesis and transition metal complexation

A practical enantioselective synthesis of chiral β-diketonate ligands 1a-1d, which are of ‘pseudo planar-chiral’ topology, is described. Additionally, the first chiral bis(diketonates) 2a-2c, ligands of C₂-symmetry that are isoelectronic with respect to related salen ligand systems, have been prepared. Protocols for the metallation of ligands 1a-1d, 2b and 2c are reported.     

Nucleoside and oligonucleotide pyrene conjugates with 1,2,3-triazolyl or ethynyl linkers: synthesis,duplex stability,and fluorescence changes generated by the DNA-dye connector

Fluorescent nucleosides and oligonucleotides functionalized with pyrene were synthesized using ‘click’ chemistry or the Sonogashira cross-coupling reaction. The dye was connected to position-7 of 7-deaza-2′-deoxyguanosine or to the 2′-deoxyribofuranose moiety. Four different DNA-dye connectors with 1,2,3-triazolyl residues or triple bonds were constructed. Phosphoramidites of the pyrene conjugates (9, 14, 25) were prepared and used in solid-phase synthesis. Short linkers (2, 4) destabilize DNA, while long linkers (1) increased duplex stability. Nucleosides and oligonucleotides with single dye incorporations show linker dependent fluorescence. Linker dependent excimer emission with pyrenes in proximal positions was also observed. A ‘superchromophore’ formed by the 7-deaza-2′-deoxyguanosine ethynylpyrene conjugate shows strong red shifted fluorescence emission at 495 nm.     

Selective synthesis of 2-pyridones and pyrimidine-2,4-diones by neutral rhodium(I) complex-catalyzed cyclocotrimerization of alkynes and isocyanates

A neutral rhodium(I) complex, ‘RhCl(PPh₃)₂’ generated by the combination of [RhCl(C₂H₄)₂]₂ with a fourfold amount of PPh₃, effectively catalyzed the cyclocotrimerization of alkynes (1) and isocyanates (2) to give 2-pyridones (3) and/or pyrimidine-2,4-diones (4), selectively, by controlling the molar ratio of alkynes (1) and isocyanates (2).     

Supramolecular structures containing ‘isolated’ pentaborate anions and non-metal cations: Crystal structures of [Me3NCH2CH2OH][B5O6(OH)4] and [4-MepyH, 4-Mepy][B5O6(OH)4]

The solid-state structures of two non-metal pentaborates [Me₃NCH₂CH₂OH][B₅O₆(OH)₄] (1) and [4-MepyH, 4-Mepy][B₅O₆(OH)₄] (2) have been determined by single-crystal X-ray diffraction methods. Structures 1 and 2 both contain supramolecular pentaborate frameworks held together by extensive H-bond interactions. The framework of 1 exists essentially as planes of pentaborate anions linked via three pairwise ‘planar’ β → α interactions, with a fourth β → β interaction crosslinking the planes. The framework of 2 is very similar except that one of the three pairwise linkages within the plane is replaced by pairwise ‘step-like’ bifurcated H-bonds to both α sites of a neighboring anion. The cations in 1 and the cations and neutral 4-Mepy ligands in 2 are present in the framework cavities and channels, with additional H-bond interactions existing between cations and anions.     

FRET-derived ratiometric fluorescence sensor for Cu

New N-(pyrenylmethyl)naphtho-azacrown-5 (1) was synthesized as an ‘On-Off’ fluorescent chemosensor for Cu²⁺. Excited at 240 nm corresponding to the absorption of naphthalene unit (energy donor) of 1, emission at 380 nm from pyrene unit (energy acceptor) is observed, indicating that intramolecular fluorescence resonance energy transfer (FRET-On) occurs in 1. When Cu²⁺ is added to a solution of 1, however, the fluorescence of pyrene is strongly quenched (FRET-Off) whereas that of naphthalene group is revived. Such FRET ‘On-Off’ behavior of 1 is observed only in the case of Cu²⁺ binding, but not for other metal cations. The high selectivity of 1 toward Cu²⁺ can be potentially applied to a new kind of FRET-based chemosensor. The FRET On-Off behavior is supported by computational studies. The calculated molecular orbitals of HOMO and LUMOs suggest the excited-state interactions leading to FRET from naphthalene to pyrene in 1, but no electron density changes in 1·Cu²⁺ complex.     

Synthesis and photochromic reactivity of diarylethene trimers bridged by ethenyl and ethynyl unit

Two diarylethene trimers bridged by ethenyl and ethynyl groups were synthesized and their photochromic behaviors were examined. Upon irradiation of the trimers 2 and 4 with UV light, one-three photoinduced cyclization reactions occur. Each isomer was isolated and analyzed by ¹H NMR spectrum. The quantum yield of 2 and 4 is 0.52 and 0.311, respectively.     

Synthesis and photochromic behaviour of new methyl induced linear and angular thieno-2H-chromenes

New methyl induced linear and angular thieno-2H-chromenes 4, 5 and 6 were prepared by reaction of new methylated 6-hydroxybenzo[b]thiophenes 2 (a, b and c) and propargylic alcohols 3a and 3b, using acidic Alumina Brockmann I as catalyst and drying agent. Compounds 2 were prepared in good to excellent yields in a ‘one pot’ three step reaction from the corresponding bromo compounds 1. The photochromic behaviour of compounds 4, 5 and 6b was evaluated with the aid of a classical set of spectrokinetic parameters, and compared to reference compounds that are benzoannellated in the 5,6 and 6,7 positions of the chromene (naphthopyrans) and also to thieno-2H-chromenes 7 and 8, previously prepared, which are analogues of 5a. The resistance to fatigue (photodegradation) under continuous irradiation was also evaluated.     

A triphenylamine based multi-analyte chemosensor for Hg and Cu ions in MeCN/H2O

A novel triphenylamine based oxidative chemosensor TOC was synthesized. The chromogenic and fluorogenic behaviors of TOC towards Hg²⁺ and Cu²⁺ ions in a binary mixture of MeCN/H₂O (9/1) were dramatically different. TOC displays colorimetric ‘naked eye’ recognition of Hg²⁺ and fluorogenic ‘turn on’ response towards Cu²⁺ via a unique cyclization reaction using two different detection modes. Moreover, TOCAZOL obtained from the oxidative cyclization reaction of TOC with Cu(ClO₄)₂ can be used as a selective fluorescent sensor toward Hg²⁺ ion.     

Dual responsive chemosensors for anions: the combination of fluorescent PET (Photoinduced Electron Transfer) and colorimetric chemosensors in a single molecule

The design and synthesis of two novel fluorescent PET anion sensors is described, based on the principle of ‘fluorophore-spacer-(anion)receptor’. The sensors 1 and 2 employ simple diaromatic thioureas as anion receptors, and the fluorophore is a naphthalimide moiety that absorbs in the visible part of the spectrum and emits in the green. Upon recognition of anions such as F⁻ and AcO⁻ in DMSO, the fluorescence emission of 1 and 2 was ‘switched off’, with no significant changes in the UV-vis spectra. This recognition shows a 1:1 binding between the receptor and the anions. In the case of F⁻, further additions of the anion, gave rise to large changes in the UV-vis spectra, where the λ_max at 455 nm was shifted to 550 nm. These changes are thought to be due to the deprotonation of the 4-amino moiety of the naphthalimide fluorophore. This was in fact found to be the case, using simple naphthalimide derivatives such as 6. Sensors 1 and 2 can thus display dual sensing action; where at low concentrations, the fluorescence emission is quenched, and at higher concentrations the absorption spectra are modulated.     

Unexpected formation of new photochromic compounds derived from 3,3-diphenyl-3H-naphtho[2,1-b]pyran-1-one

Two new unexpected photochromic compounds were obtained from naphtho[2,1-b]pyran-1-one 1. The reaction of this ketone with the silyl enol ether methyl trimethylsilyl dimethylketene acetal, catalyzed by TiCl₄, afforded the photochromic dihydronaphtho[2,1-b]pyranone 2. The Reformatsky reaction of ketone 1 with ethyl bromoacetate led to the formation of the expected alcohol that under acid treatment gave, unexpectedly, the novel photochromic benzocoumarin 6. UV irradiation compounds 2 and 6 in solution provided thermally stable photoproducts that returned to the initial uncoloured forms under visible irradiation. The photochromic behaviour of these compounds and the structures of the photoproducts formed in these reactions were characterized by 1D and 2D NMR.