VUV photodissociation of thiazole molecule investigated by TOF‐MS and photoelectron photoion coincidence spectroscopy

Photoelectron photoion coincidence measurements have been performed for the thiazole (C₃H₃NS) molecule in gas phase, using time‐of‐flight mass spectrometry in the electron‐ion coincidence mode and vacuum ultraviolet synchrotron radiation. photoelectron photoion coincidence spectra have been recorded as a function of the photon energy covering the valence range from 10 to 21 eV. The resulting photoionization products as well as the dissociation pathways leading to the ionic species were proposed and discussed. We have also performed density functional theory and ab initio calculations for the neutral molecule, its cation and the ion fragments produced in order to determine their electronic and structural parameters. Copyright © 2014 John Wiley & Sons, Ltd.     

Photofragmentation of 2‐Deoxy‐D‐Ribose Molecules in the Gas Phase

We have measured the synchrotron‐induced photofragmentation of isolated 2‐deoxy‐D ‐ribose molecules (C₅H₁₀O₄) at four photon energies, namely, 23.0, 15.7, 14.6, and 13.8 eV. At all photon energies above the molecule′s ionization threshold we observe the formation of a large variety of molecular cation fragments, including CH₃⁺, OH⁺, H₃O⁺, C₂H₃⁺, C₂H₄⁺, CH_xO⁺ (x=1,2,3), C₂H_xO⁺ (x=1–5), C₃H_xO⁺ (x=3–5), C₂H₄O₂⁺, C₃H_xO₂⁺ (x=1,2,4–6), C₄H₅O₂⁺, C₄H_xO₃⁺ (x=6,7), C₅H₇O₃⁺, and C₅H₈O₃⁺. The formation of these fragments shows a strong propensity of the DNA sugar to dissociate upon absorption of vacuum ultraviolet photons. The yields of particular fragments at various excitation photon energies in the range between 10 and 28 eV are also measured and their appearance thresholds determined. At all photon energies, the most intense relative yield is recorded for the m/q=57 fragment (C₃H₅O⁺), whereas a general intensity decrease is observed for all other fragments— relative to the m/q=57 fragment—with decreasing excitation energy. Thus, bond cleavage depends on the photon energy deposited in the molecule. All fragments up to m/q=75 are observed at all photon energies above their respective threshold values. Most notably, several fragmentation products, for example, CH₃⁺, H₃O⁺, C₂H₄⁺, CH₃O⁺, and C₂H₅O⁺, involve significant bond rearrangements and nuclear motion during the dissociation time. Multibond fragmentation of the sugar moiety in the sugar–phosphate backbone of DNA results in complex strand lesions and, most likely, in subsequent reactions of the neutral or charged fragments with the surrounding DNA molecules.     

Dissociation Pathway Analysis of Thymine under Low Energy VUV Photon Excitation

Photon-induced dissociation pathways of thymine are investigated with vacuum ultraviolet photoionization mass spectrometry and theoretical calculations. The photoionization mass spectra of thymine at different photon energy are measured and presented. By selecting suitable photon energy, exclusively molecular ion m/z=126 is obtained. At photon energy of 12.0 eV, the major ionic fragments at m/z=98, 97, 84, 83, 70, and 55 are obtained, which are assigned to C₄H₆N₂₄O⁺、C₄H₅N₂O⁺、C₃H₄N₂O⁺(or C₄H₆NO⁺)、C₄H₅NO⁺、C₂NO₂⁺ and C₃H₅N⁺, respectively. With help of theoretical calculations, the detailed dissociation pathways of thymine at low energy are well established.     

Dissociative Photoionization of m-Xylene

The photoionization and dissociative photoionization of m-xylene (C₈H₁₀) were researched by using synchrotron radiation vacuum ultraviolet (SR-VUV) and supersonic expanding molecular beam reflectron time-of-flight mass spectrometer (RFTOF-MS) system. The photoionization efficiency spectra (PIEs) of parent ion C₈H₁₀⁺ and main fragment ions C₈H₉⁺ and C₇H₇⁺ were observed, and the ionization energy (IE) of m-xylene and appearance energies (AEs) of main fragment ions C₈H₉⁺ and C₇H₇⁺ were determined to be 8.60 ± 0.03 eV, 11.76 ± 0.04 eV and 11.85 ± 0.05 eV, respectively. Structures of reactant, transition states (TSs), intermediates (INTs), and products involved in two dominant dissociation channels were optimized at the B3LYP/6-311++G(d,p) level, and the relative energies were calculated at the G3 level. Based on the results, two major dissociative photoionization channels, C₇H₇⁺+CH₃ and C₈H₉⁺+H were calculated at the B3LYP/6-311++G(d,p) level. On the basis of theoretical and experimental results, the dissociative photoionization mechanisms of m-xylene were proposed. The C–H or C–C bond dissociation and hydrogen migration are the main processes in the dissociation channels of m-xylene cation.

     

Photoionization and Dissociation Study of 2-Methyl-2-propen-1-ol: Experimental and Theoretical Insights

The photoionization and dissociation of 2-methyl-2-propen-1-ol (MPO) have been investigated by using molecular beam experimental apparatus with tunable vacuum ultravioletsynchrotron radiation in the photon energy region of 8.0-15.5 eV. The photoionization efficiency (PIE) curves for molecule ion and fragment ions: C₄H₈O⁺、C₄H₇O⁺、C₃H₅O⁺、C₄H₇⁺、C₄H₆⁺、C₄H₅⁺、C₂H₄O⁺、C₂H₃O⁺、C₃H₆⁺、C₃H₅⁺、C₃H₃⁺、CH₃O⁺、CHO⁺ have been measured, and the ionization energy (IE) and the appearance energies (AEs) of the fragment ions have been obtained. The stable species and the first order saddle points have been calculated on the CCSD(T)/cc-pvTZ//B3LYP/6-31+G(d,p) level. With combination of theoretical and experimental results, the dissociative photoionization pathways of 2-methyl-2-propen-1-ol are proposed. Hydrogen migrations within the molecule are the dominant processes in most of the fragmentation pathways of MPO.     

VUV Photoionization and Dissociation of Tyramine and Dopamine: the Joint Experimental and Theoretical Studies

Photon induced dissociation investigations of neutral tyramine and dopamine are carried out with synchrotron vacuum ultraviolet photoionization mass spectrometry and theoretical calculations. At low photon energy, only molecular ions are measured by virtue of near-threshold photoionization. While increasing photon energy to 11.7 eV or more, four distinct fragment ions are obtained for tyramine and dopamine, respectively. Besides, the ioniza-tion energies of tyramine and dopamine are determined to be 7.98±0.05 and 7.67±0.05 eV by measuring the photoionization efficiency curves of corresponding molecular ions. With help of density function theory calculations, the detailed fragmentation pathways are es-tablished as well. These two molecular cations have similar aminoethyl group elimination pathways, C₇H₈O₂^+·(m/z=124) and C₇H₈O^+·(m/z=108) are supposed to be generated by the McLafferty rearrangement via γ-hydrogen (γ-H) shift inducing β-fission. And CH₂NH₂⁺ is proposed to derive from the direct fission of C7-C8 bond. Besides, the McLafferty rear-rangement and the C7-C8 bond fission are validated to be dominant dissociation pathways for tyramine and dopamine cations.     

Vacuum ultraviolet photoionization mass spectrometric study of cyclohexene

In this work, photoionization and dissociation of cyclohexene have been studied by means of coupling a reflectron time‐of‐flight mass spectrometer with the tunable vacuum ultraviolet (VUV) synchrotron radiation. The adiabatic ionization energy of cyclohexene as well as the appearance energies of its fragment ions C₆H₉⁺, C₆H₇⁺, C₅H₇⁺, C₅H₅⁺, C₄H₆⁺, C₄H₅⁺, C₃H₅⁺ and C₃H₃⁺ were derived from the onset of the photoionization efficiency (PIE) curves. The optimized structures for the transition states and intermediates on the ground state potential energy surfaces related to photodissociation of cyclohexene were characterized at the ωB97X‐D/6‐31+g(d,p) level. The coupled cluster method, CCSD(T)/cc‐pVTZ, was employed to calculate the corresponding energies with the zero‐point energy corrections by the ωB97X‐D/6‐31+g(d,p) approach. Combining experimental and theoretical results, possible formation pathways of the fragment ions were proposed and discussed in detail. The retro‐Cope rearrangement was found to play a crucial role in the formation of C₄H₆⁺, C₄H₅⁺ and C₃H₅⁺. Intramolecular hydrogen migrations were observed as dominant processes in most of the fragmentation pathways of cyclohexene. The present research provides a clear picture of the photoionization and dissociation processes of cyclohexene in the 8‐ to 15.5‐eV photon energy region. Copyright © 2016 John Wiley & Sons, Ltd.     

Sequential two photon dissociation of cyanobenzene cation

In continuation of our studies in the new area of multiple photon laser dissociation of ions, we report evidence for the sequential two photon dissociation of cyanobenzene radical cation, C₆H₅CN⁺, to produce predominantly C₆H⁺₄ and HCN. The complete excitation function for this process, as well as for a single photon process occurring at higher energies, are compared to the photoelectron spectrum of cyanobenzene to elucidate the nature of the transitions involved. An exact kinetic expression is derived and used to obtain information about the absorption spectra of C₆H₅CN⁺ in its ground vibronic state and with internal energy between 2.0 and 2.8 eV. Finally, data from our earlier study of benzene radical cation is reanalyzed and discussed.     

Photofragmentation of Isoleucine by Vacuum Ultraviolet Photoionization

Vacuum ultraviolet photon-induced ionization and dissociation of isoleucine are investi-gated with synchrotron radiation photoionization mass spectroscopy and theoretical cal-culations. The main fragment ions at m/z=86, 75, 74, 69, 57, 46, 45, 44, 41, 30, 28, and 18 from isoleucine are observed in the mass spectrum at the photon energy of 13 eV. From the photoionization e±ciency curves, appearance energies for the principal fragment ions C₅H₁₂N⁺ (m/z=86)、C₂H₅NO₄⁺ (m/z=75)、C₅H₉⁺ (m/z=69)、C₄H₉⁺(m/z=57), and CH₄N⁺(m/z=30) are determined to be 8.84±0.07, 9.25±0.06, 10.20±0.12, 9.25±0.10, and 11.05±0.07 eV, respectively, and possible formation pathways are established in detail by the calculations at the B3LYP/6-31++G(d, p) levels. These proposed channels include simple bond cleavage reactions as well as reactions involving intermediates and transition structures. The experimental and computational appearance energies or barriers are in good agreement.     

Channel-Resolved Ultrafast Dissociation Dynamics of NO2 Molecules Studied via Femtosecond Time-Resolved Ion Imaging

The ultrafast dissociation dynamics of NO₂ molecules was investigated by femtosecond laser pump-probe mass spectra and ion images. The results show that the kinetic energy release of NO⁺ ions has two components, 0.05 eV and 0.25 eV, and the possible dissociation channels have been assigned. The channel resolved transient measurement of NO⁺ provides a method to disentangle the contribution of ultrafast dissociation pathways, and the transient curvesof NO⁺ ions at different kinetic energy release are fitted by a biexponential function. The fast component with a decay time of 0.25 ps is generated from the evolution of Rydberg states. The slow component is generated from two competitive channels, one of the channel is absorbing one 400 nm photon to the excited state A²B2, which has a decay time of 30.0 ps, and the other slow channel is absorbing three 400 nm photons to valence type Rydberg states which have a decay time less than 7.2 ps. The channel and time resolved experiment present the potential of sorting out the complex ultrafast dissociation dynamics of molecules.     

Experimental and theoretical study on the photoionization of styrene

This study employed a vacuum ultraviolet synchrotron radiation source and reflectron time-of-flight mass spectrometry (TOF-MS) to investigate the photoionization and dissociation of styrene. By analyzing the photoionization mass spectrum and efficiency curve alongside G3B3 theoretical calculations, we determined the ionization energy of the molecular ion, appearance energy of fragment ions, and relevant dissociation pathways. The major ion peaks observed in the photoionization mass spectra of styrene correspond to C₈H₈⁺, C₈H₇⁺ and C₆H₆⁺. The ionization energy of styrene is measured as 8.46 ± 0.03 eV, whereas the appearance energies of C₈H₇⁺ and C₆H₆⁺ are found to be 12.42 ± 0.03 and 12.22 ± 0.03 eV, respectively, in agreement with theoretical values. The main channel for the photodissociation of styrene molecular ions is the formation of benzene ions, whereas the dissociation channel that loses hydrogen atoms is the secondary channel. Based on the experimental results and empirical formulas, the required dissociation energies (E_d) of C₈H₇⁺, C₈H₆⁺ and C₆H₆⁺ are calculated to be (3.96 ± 0.06), (4.00 ± 0.06) and (3.76 ± 0.06) eV, respectively. Combined with related thermochemical parameters, the standard enthalpies of formations of C₈H₈⁺, C₈H₇⁺, C₈H₆⁺ and C₆H₆⁺ are determined to be 964.2, 1346.3, 1350.2 and 1327.0 kJ/mol, respectively. Based on the theoretical study, the kinetic factors controlling the styrene dissociation reaction process are determined by using the Rice–Ramsperger–Kassel–Marcus (RRKM) theory. This provides a reference for further research on the atmospheric photooxidation reaction mechanism of styrene in atmospheric and interstellar environments.     

Analytical photoion spectroscopy applied to dissociative single and double photoionization of diatomic molecules (H2, N2, O2, CO,and NO)

This work reports the principle, advantage, and limitations of analytical photoion spectroscopy which has been applied to dissociative photoionization processes for diatomic molecules such as H₂, N₂, CO, and NO. Characteristic features observed in the differential photoion spectra are summarized with a focus on (pre)dissociation of(i) multielectron excitation states commonly observed in the inner valence regions,(ii) shape resonances, and(iii) doubly charged parent ions. Possible origins for negative peaks in the differential spectra are discussed. This spectroscopy is applied to the reported photoion branching ratios for D₂ (and H₂ at high energies). The main findings are as follows: (1) The direct dissociation of theX ²Σ _g ⁺ (1sσ _g ) state of D ₂ ⁺ , the two-electron excited state¹Σ _u ⁺ (2pσ _u 2sσ _g ) of D₂, and the²Σ _u ⁺ (2pσ _u ) state of D ₂ ⁺ appear clearly in the differential spectrum, as previously observed for H₂. (2) Decay of H ₂ ⁺ (D ₂ ⁺ ) to H⁺ (D⁺) above 38 eV is due to the direct dissociation of highly excited states of H ₂ ⁺ (D ₂ ⁺ ) such as the²Σ _g ⁺ (2sσ _g ) and high-lying Rydberg states converging on H ₂ ²⁺ (D ₂ ²⁺ ). (3) In the ionization continuum of H ₂ ²⁺ (D ₂ ²⁺ ) peculiar dissociation pathways are observed. The differential photoion spectra for O₂ derived from the reported photoion branching ratios are also presented. The (pre)dissociation of theb ⁴Σ _g ^? ,B ²Σ _g ^? , III²Π _u ,²Σ _u ^? , and^2,4Σ _g ^? states of O ₂ ⁺ appears as the corresponding positive values in the spectra in accord with previous observations. Some other dissociation pathways possibly contributing to the spectra are discussed including dissociative double ionization.     

Dissociative photoionization of Al2(Ch3)6 and Al2(Ch3)3Cl3 in the range 40–100 eV

Dissociation processes of the organoaluminum compounds Al₂(CH₃)₆ and Al₂(CH₃)₃Cl₃ have been studied in the range of valence and Al:2p core-level ionization by means of photoelectron–photoion and photoion–photoion coincidence techniques. The double-ionization threshold and the Al:2p core-ionization threshold of Al₂(CH₃)₆ are estimated to be about 30 and 80 eV

1 1 eV = 96.4853 kJ mol^?1.

respectively. The relative yields of the H⁺?Al⁺ and H⁺?CH_m,⁺ (m′ = 0–3) ion pairs are enhanced around the Al:2p core-ionization threshold of Al₂(CH₃)₆. The photoion–photoion coincidence intensities of Al₂(CH₃)₃Cl₃ are negligibly small throughout the energy range studied. The ratio of the relative yield of AlC₂H₆⁺ to that of Al⁺ increases smoothly through the Al:2p core-ionization and/or excitation region of Al₂(CH₃)₃Cl₃. The variation of the fragmentation pattern with photon energy is discussed in conjunction with the relevant electronic states.     

Gas-phase fragmentation reactions of protonated glycerol and its oligomers: Metastable and collision-induced dissociation reactions,associated deuterium isotope effects and the structure of [C3H5O]+, [C2H5O]+, [C2H4O]+. and [C2H3O]+ ions

The chemistry of glycerol subjected to a high-energy particle beam was explored by studying the mass spectral fragmentation characteristics of gas-phase protonated glycerol and its oligomers by using tandem mass spectrometry. Both unimolecular metastable and collision-induced dissociation reactions were studied. Collision activation of protonated glycerol results in elimiation of H₂O and CH₃OH molecules. The resulting ions undergo further fragmentations. The origin of several fragment ions was established by obtaining their product and precursor ion spectra. Corresponding data for the deuterated analogs support those results. The structures of the fragment ions of compositions [C₃H₅O]⁺, [C₂H₅O]⁺, [C₂H₄O]^+. and [C₂H₃O]⁺ derived from protonated glycerol were also identified. Proton-bound glycerol oligomers fragment principally via loss of neutral glycerol molecules. Dissociation of mixed clusters of glycerol and deuterated glycerol displays normal secondary isotope effects.     

Dissociative photoionization of isoprene: experiments and calculations

Vacuum ultraviolet (VUV) dissociative photoionization of isoprene in the energy region 8.5–18 eV was investigated with photoionization mass spectroscopy (PIMS) using synchrotron radiation (SR). The ionization energy (IE) of isoprene as well as the appearance energies (AEs) of its fragment ions C₅H₇⁺, C₅H₅⁺, C₄H₅⁺, C₃H₆⁺, C₃H₅⁺, C₃H₄⁺, C₃H₃⁺ and C₂H₃⁺ were determined with photoionization efficiency (PIE) curves. The dissociation energies of some possible dissociation channels to produce those fragment ions were also determined experimentally. The total energies of C₅H₈ and its main fragments were calculated using the Gaussian 03 program and the Gaussian‐2 method. The IE of C₅H₈, the AEs for its fragment ions, and the dissociation energies to produce them were predicted using the high‐accuracy energy model. According to our results, the experimental dissociation energies were in reasonable agreement with the calculated values of the proposed photodissociation channels of C₅H₈. Copyright © 2009 John Wiley & Sons, Ltd.     

193-nm Photodissociation of ions from saturated and unsaturated aliphatic molecules

To determine the analytical utility of photodissociation as a general fragmentation technique for tandem mass spectrometry of organic ions, the ability to fragment those ions considered least likely to absorb photons efficiently was investigated. To this end, the ability to photodissociate ions of aliphatic compounds by using 193-nm photons has been studied. Three fragment ions, the C₄H ₉ ⁺ ion from n-hexane, the C₄H ₇ ⁺ ion from 2-hexene, and C₄H ₅ ⁺ from 2-hexyne, have been photodissociated. The fragmentation efficiencies for all three ions studied were between 25 and 45%. The photofragment ion spectrum for each precursor ion studied is made up of characteristic fragments. These spectra demonstrate the ability to photodissociate aliphatic ions that originate from both saturated and unsaturated molecules. This provides substantial hope that virtually all organic ions will be able to be photodissociated by using 193-nm photons.     

Stereoelectronic effects on the retro-Diels-Alder fragmentation of ionized bicyclo[4.3.0]nona-3,7-dienes

The electron impact and collision-induced dissociation mass spectra of cis- and trans-annulated bicyclo[4.3.0]nona-3,7-dienes differ in their relative abundances of [C₅H₆]⁺˙ fragments formed by the retro-Diels-Alder decomposition. The formation of [C₅H₆]⁺˙ is not preceded by hydrogen migration in the short-lived and long-lived molecular ions. The appearance energy of [C₅H₆]⁺˙ from both annulation isomers is identical within experimental error: AE_cis([C₅H₆]⁺˙)=10.56±0.10 eV and AE_trans([C₅H₆]⁺˙)=10.54±0.15 eV. The barrier to the retro-Diels-Alder fragmentation lies 68–76 kJ mol^?1 above the thermo-chemical threshold corresponding to [C₅H₆]⁺˙ + C₄H₆. Investigation of the two-dimensional reaction coordinate by the Topological Molecular Orbital treatment shows that the lowest energy path for the retro-Diels-Alder reaction involves a two-step dissociation of the C(5)? C(6) and C(1)? C(2) bonds in the molecular ion, the latter step overcoming a barrier, calculated as 80 kJ mol^?1 above the thermochemical threshold. The stereochemical difference between the geometric isomers is due to stereoelectronic assistance of the π orbitals of the cis-annulated isomer in the cleavage of the C(5)? C(6) bond. Other mechanisms of the retro-Diels–Alder reaction are discussed.     

A Photoionization study of some benzoyl compounds—Thermochemistry of [C7H5O]+ formation

Appearance energies for [C₇H₅O]⁺ fragment ions, formed from a variety of benzoyl compounds, have been measured by photon impact. The mean heat of formation calculated for [C₇H₅O]⁺ is 705 ± 6 kJ mol^?1, which can be correlated with either a single threshold structure or a mixture of structures with similar heats of formation. Previously observed variations of ΔH_f([C₇H₅O]⁺) with precursor molecule are shown to be consistent with a structure dependent kinetic shift, rather than the presence of isolated electronic states.     

A photo-ionization study of organosulfur ring compounds: Thiirane,thietane and tetrahydrothiophene

The gas phase heats of formation of several organosulfur cations were determined from thiirane, thietane and tetrahydrothiophene precursor molecules by photoionization mass spectrometry. Heats of formation at 0 K and 298 K are reported for the following ions: [H₂CS]^+˙, [H₃CS]⁺, [C₂H₃S]⁺, [C₂H₄S]^+˙, [C₃H₅S]⁺, [C₃H₆S]^+˙, [C₄H₇S]⁺ and [C₄H₈S]^+˙. The [C₄H₇S]⁺ (m/z 87), [C₂H₄S]^+˙ (m/z 60), [C₂H₃S]⁺ (m/z 59), [C₄H₇]⁺ (m/z 55), [C₄H₆]^+˙ (m/z 54) and [CH₂S]^+˙ (m/z 46) ions are produced from metastable tetrahydrothiophene ions at photon energies between 10.2 and 10.7 eV. Decay rates of internal energy selected parent ions to the m/z 60, 59, 55 and 54 fragments were measured by threshold photoelectron-photoion coincidence, the results of which are compared to statistical theory (RRKM/QET) calculations. The [C₂H₄S]^+˙ ion from tetrahydrothiophene is found to have the thioacetaldehyde structure. From the measured [C₂H₄S]^+˙ onset a ΔH = 50±8 kJ mol^?1 was calculated for the thioacetaldehyde molecule.