Ionization‐Induced Solvent Migration in Acetanilide‐Methanol Clusters Inferred from Isomer‐Selective Infrared Spectroscopy

We present the resonance‐enhanced multiphoton ionization, infrared‐ultraviolet hole burning (IR‐UV HB), and IR dip spectra of the trans‐acetanilide–methanol (AA–MeOH) cluster in the S₀, S₁, and cationic ground state (D₀) in a supersonic jet. The IR‐UV HB spectra demonstrate the co‐existence of two isomers in S_0,1, in which MeOH binds either to the NH or the CO site of the peptide linkage in AA, denoted as AA(NH)–MeOH and AA(CO)–MeOH. When AA(CO)–MeOH is selectively ionized, its IR spectrum in D₀ is the same as that measured for AA⁺(NH)–MeOH. Thus, photoionization of AA(CO)–MeOH induces migration of MeOH from the CO to the NH site with 100% yield.     

APCI as an innovative ionization mode compared with EI and CI for the analysis of a large range of organophosphate esters using GC‐MS/MS

Organophosphate esters (OPEs) are chemical compounds incorporated into materials as flame‐proof and/or plasticizing agents. In this work, 13 non‐halogenated and 5 halogenated OPEs were studied. Their mass spectra were interpreted and compared in terms of fragmentation patterns and dominant ions via various ionization techniques [electron ionization (EI) and chemical ionization (CI) under vacuum and corona discharge atmospheric pressure chemical ionization (APCI)] on gas chromatography coupled to mass spectrometry (GC‐MS). The novelty of this paper relies on the investigation of APCI technique for the analysis of OPEs via favored protonation mechanism, where the mass spectra were mostly dominated by the quasi‐molecular ion [M + H]⁺. The EI mass spectra were dominated by ions such as [H₄PO₄]⁺, [M–R]⁺, [M–Cl]⁺, and [M–Br]⁺, and for some non‐halogenated aryl OPEs, [M]^+● was also observed. The CI mass spectra in positive mode were dominated by [M + H]⁺ and sometimes by [M–R]⁺, while in negative mode, [M–R]⁻ and more particularly [X]^‐ and [X₂]^‐● were mainly observed for the halogenated OPEs. Both EI and APCI techniques showed promising results for further development of instrumental method operating in selective reaction monitoring mode. Instrumental detection limits by using APCI mode were 2.5 to 25 times lower than using EI mode for the non‐brominated OPEs, while they were determined at 50‐100 times lower by the APCI mode than by the EI mode, for the two brominated OPEs. The method was applied to fish samples, and monitored transitions by using APCI mode showed higher specificity but lower stability compared with EI mode. The sensitivity in terms of signal‐to‐noise ratio varying from one compound to another. Copyright © 2016 John Wiley & Sons, Ltd.     

Unique para‐effect in electron ionization mass spectra of bis(perfluoroacyl) derivatives of bifunctional aminobenzenes

A new kind of ‘para‐effect’ under electron ionization (EI) conditions has been discovered for a series of bis(perfluoroacyl) derivatives of o‐, m‐ and p‐phenylenediamines, ‐hydroxybenzeneamines and ‐mercaptobenzeneamines of a common structure RCOX–C₆H₄–NHCOR (X = NH, S, O; R = CF₃, C₂F₅, C₃F₇). Only the para‐isomers showed successive loss of a radical RCO^? and a molecule RCN, leading to very intense peaks in the EI spectra. The composition and the origin of the [M–COR–NCR]⁺ ions were confirmed by exact mass measurements and linked scan experiments. The proposed mechanism of their formation takes into account likely para‐quinoid structures of the precursor ions. A similar rearrangement has not been observed for para‐isomers in the series of bis(perfluoroacyl) derivatives of benzenediols, mercaptophenols and dimercaptobenzenes. Published in 2010 by John Wiley & Sons, Ltd.     

Determination of elemental compositions by gas chromatography/time‐of‐flight mass spectrometry using chemical and electron ionization

Many metabolomic applications use gas chromatography/mass spectrometry (GC/MS) under standard 70 eV electron ionization (EI) parameters. However, the abundance of molecular ions is often extremely low, impeding the calculation of elemental compositions for the identification of unknown compounds. On changing the beam‐steering voltage of the ion source, the relative abundances of molecular ions at 70 eV EI were increased up to ten‐fold for alkanes, fatty acid methyl esters and trimethylsilylated metabolites, concomitant with 2‐fold absolute increases in ion intensities. We have compared the abundance, mass accuracy and isotope ratio accuracy of molecular species in EI with those in chemical ionization (CI) with methane as reagent gas under high‐mass tuning. Thirty‐three peaks of a diverse set of trimethylsilylated metabolites were analyzed in triplicate, resulting in 342 ion species ([M+H]⁺, [M–CH₃]⁺ for CI and [M]^{+ .} , [M–CH₃]^{+ .} for EI). On average, CI yielded 8‐fold more intense molecular species than EI. Using internal recalibration, average mass errors of 1.8 ± 1.6 mm/z units and isotope ratio errors of 2.3 ± 2.0% (A+1/A ratio) and 1.7 ± 1.8% (A+2/A ratio) were obtained. When constraining lists of calculated elemental compositions by chemical and heuristic rules using the Seven Golden Rules algorithm and PubChem queries, the correct formula was retrieved as top hit in 60% of the cases and within the top‐3 hits in 80% of the cases. Copyright © 2010 John Wiley & Sons, Ltd.     

Development of a new electron ionization/field ionization ion source for gas chromatography/time‐of‐flight mass spectrometry

We have developed a combined EI/FI source for gas chromatography/orthogonal acceleration time‐of‐flight mass spectrometry (GC/oaTOFMS). In general, EI (electron ionization) and FI (field ionization) mass spectra are complementary: the EI mass spectrum contains information about fragment ions, while the FI mass spectrum contains information about molecular ions. Thus, the comparative study of EI and FI mass spectra is useful for GC/MS analyses. Unlike the conventional ion sources for FI and EI measurements, the newly developed source can be used for both measurements without breaking the ion source vacuum or changing the ion source. Therefore, the combined EI/FI source is more preferable than the conventional EI or FI ion source from the viewpoint of the reliability of measurements and facility of operation. Using the combined EI/FI source, the complementarity between EI and FI mass spectra is demonstrated experimentally with n‐hexadecane (100 pg): characteristic fragment ions for the n‐alkane such as m/z 43, 57, 71, and 85 are obtained in the EI mass spectrum, while only the parent peak of m/z 226 (M⁺) without any fragment ions is observed in the FI mass spectrum. Moreover, the field desorption (FD) measurement is also demonstrated with poly(ethylene glycol)s M600 (10 ng) and M1000 (15 ng). Signals of [M+H]⁺, [M+Na]⁺ and [M+K]⁺ are clearly detected in the FD mass spectra. Copyright © 2009 John Wiley & Sons, Ltd.     

Solid,Solution, and Theoretical Approach of [Cu(CN‐acac)(dmeen)]+

The reaction of bis(3‐cyano‐2,4‐pentanedionato)copper(II), [Cu(NC‐acac)₂] with the nitrogenous base N,N‐dimethyl, N′‐ethyl‐1,2‐ethylenediamine (dmeen) in the presence of Cu(ClO₄)₂ · 6H₂O, afforded a new cationic mixed‐ligand chelate [Cu(CN‐acac)(dmeen)]⁺. Its structure was characterized spectroscopically (IR, UV/Vis, EPR) and verified by X‐ray diffraction studies as [Cu(CN‐acac)(dmeen)(H₂O)]ClO₄. The coordination of CN‐acac^– as bridging ligand leads to a polymeric helical chain, which extends in the crystallographic c axis. Density functional theory (DFT) calculations suggest that in the solid state the anion CN‐acac^– binding is envisaged through the nitrogen atom of the cyanido group, establishing an octahedral arrangement around copper, whereas in solution, the square‐planar arrangement is prevailed, in accordance with the EPR findings.     

Substituent Effect on the Electronic Properties and Nature of the W≡C Bond in trans‐Cl(OC)(H3P)3W(≡C‐para‐C6H4X) (X = H,F, SiH3, CN,NO2, SiMe3, CMe3, NH2, NMe2) Complexes: A Computational Quantum Chemistry Study

In this investigation, we describe substituent effect on the dipole moment, ionization potential, electron affinity, structure, frontier orbitals energy, in the trans‐Cl(OC)(H₃P)₃W(≡C‐para‐C₆H₄X) (X = H, F, SiH₃, CN, NO₂, SiMe₃, CMe₃, NH₂, NMe₂) complexes using MPW1PW91 quantum chemical calculations. The nature of chemical bond between the [Cl(OC)(H₃P)₃W]⁻ and [C‐para‐C₆H₄X]⁺ fragments was illustrated with energy decomposition analysis (EDA). Percentage composition in terms of the defined groups of frontier orbitals for these complexes was inspected to investigate the character in metal–ligand bonds. Quantum theory of atoms in molecules (QTAIM) was used for illustration of metal–ligand bonds in these complexes.     

Synthesis,Crystal Structure and Spectroscopic Properties of [2,13‐Bis(1‐naphthalenylmethyl)‐5,16‐dimethyl‐2,6,13,17‐tetraazatricyclo(14,4,01.18,07.12)docosane]copper(II) Diperchlorate Acetonitrile Disolvate

The N‐functionalized macrocyclic ligand 2,13‐bis(1‐naphthalenylmethyl)‐5,16‐dimethyl‐2,6,13,17‐tetraazatricyclo(14,4,0^1.18,0^7.12)docosane (L³) and its copper(II) complex were prepared. The crystal structure of [Cu(L³)](ClO₄)₂·2CH₃CN was determined by single‐crystal X‐ray diffraction at 150 K. The copper atom, which lies on an inversion centre, has a square planar arrangement and the complex adopts a stable trans‐III configuration. The longer distance [2.081(2) Å] for Cu–N(tertiary) compared to 2.030(3) Å for Cu–N(secondary) may be due to the steric effect of the attached naphthalenylmethyl group on the tertiary nitrogen atom. Two perchlorate ions are weakly attached to copper in axial sites and are further connected to the ligand of the cation through NH ··· O hydrogen bonds [N ··· O 3.098 Å]. IR and UV/Vis spectroscopic properties are also described.     

Controlled Synthesis of Heterotrimetallic Single‐Chain Magnets from Anisotropic High‐Spin 3 d–4 f Nodes and Paramagnetic Spacers

By using the node‐and‐spacer approach in suitable solvents, four new heterotrimetallic 1D chain‐like compounds (that is, containing 3d–3d′–4f metal ions), {[Ni(L)Ln(NO₃)₂(H₂O)Fe(Tp*)(CN)₃] ? 2 CH₃CN ? CH₃OH}_n (H₂L=N,N′‐bis(3‐methoxysalicylidene)‐1,3‐diaminopropane, Tp*=hydridotris(3,5‐dimethylpyrazol‐1‐yl)borate; Ln=Gd ( 1 ), Dy ( 2 ), Tb ( 3 ), Nd ( 4 )), have been synthesized and structurally characterized. All of these compounds are made up of a neutral cyanide‐ and phenolate‐bridged heterotrimetallic chain, with a {? Fe? C?N? Ni(? O? Ln)? N?C? }_n repeat unit. Within these chains, each [(Tp*)Fe(CN)₃]^? entity binds to the Ni^II ion of the [Ni(L)Ln(NO₃)₂(H₂O)]⁺ motif through two of its three cyanide groups in a cis mode, whereas each [Ni(L)Ln(NO₃)₂(H₂O)]⁺ unit is linked to two [(Tp*)Fe(CN)₃]^? ions through the Ni^II ion in a trans mode. In the [Ni(L)Ln(NO₃)₂(H₂O)]⁺ unit, the Ni^II and Ln^III ions are bridged to one other through two phenolic oxygen atoms of the ligand (L). Compounds 1 – 4 are rare examples of 1D cyanide‐ and phenolate‐bridged 3d–3d′–4f helical chain compounds. As expected, strong ferromagnetic interactions are observed between neighboring Fe^III and Ni^II ions through a cyanide bridge and between neighboring Ni^II and Ln^III (except for Nd^III) ions through two phenolate bridges. Further magnetic studies show that all of these compounds exhibit single‐chain magnetic behavior. Compound 2 exhibits the highest effective energy barrier (58.2 K) for the reversal of magnetization in 3d/4d/5d–4f heterotrimetallic single‐chain magnets.     

A novel tetrazolate‐ and cyanide‐bridged three‐dimensional heterometallic coordination polymer: crystal structure,thermal stability and magnetic properties

By using environmentally friendly K₃[Co(CN)₆] as a cyanide source, the solvothermal reaction of CuCl₂ and tetrazole (Htta) led to a novel tetrazolate‐ and cyanide‐bridged three‐dimensional heterometallic Cu^II–Co^III complex, namely poly[[hexa‐μ₂‐cyanido‐κ¹²C :N‐pentakis(μ₃‐tetrazolato‐κ³N ¹:N ²:N ⁴)cobalt(III)tetracopper(II)] monohydrate], {[Co^IIICu^II₄(CHN₄)₅(CN)₆]·H₂O}_n , (I). The crystal structure analysis reveals that it is the first example of a (6,8,8)‐connected three‐dimensional framework with a unique topology, constructed from anionic [Co(CN)₆]³⁻ and cationic [(Cu1)₂(tta)₂]²⁺ and [(Cu2Cu3)(tta)₃]⁺ units through μ₂‐cyanide and μ₃‐tetrazolate linkers. The compound was further characterized by thermal analysis, vibrational spectroscopy (FT–IR), scanning electron microscopy/energy‐dispersive X‐ray spectroscopy (SEM–EDS) and magnetic measurements. The magnetic investigation indicates that the complex exhibits antiferromagnetic coupling between adjacent Cu^II cations.     

Facile Access to Transition‐Metal–Carbonyl Complexes with an Amidinate‐Stabilized Chlorosilylene Ligand

Three transition‐metal–carbonyl complexes [V( L )(CO)₃(Cp)] ( 1 ), [Co( L )(CO)(Cp)] ( 2 ), and [Co( L₂ )(CO)₃]⁺[CoCO)₄]^? ( 3 ), each containing stable N‐heterocyclic‐chlorosilylene ligands ( L ; L =PhC(NtBu)₂SiCl) were synthesized from [V(CO)₄(Cp)], [Co(CO)₂(Cp)], and Co₂(CO)₈, respectively. Complexes 1 , 2 , 3 were characterized by NMR and IR spectroscopy, EI‐MS spectrometry, and elemental analysis. The molecular structures of compounds 1 , 2 , 3 were determined by single‐crystal X‐ray diffraction.     

Investigation of some pentasubstituted 1,4-dihydropyridines by means of fast ion bombardment,chemical ionization and electron impact mass spectrometry

Positive fast ion bombardment, positive chemical ionization (CI⁺) and positive electron impact (EI) ionization mass spectrometry were used to investigate a number of relatively large and structurally related organic molecules. Some of the major dissociation pathways observed in the CH₄-CI⁺ mass spectra are not present under NH₃-CI⁺ conditions, but are obtained in the collision-induced dissociation (CID) spectrum of the 50 eV MH⁺ molecular ion, formed in the latter reaction. The resemblance between the EI mass spectra and their fast ion bombardment counterparts, the effect of changing the energy of the bombarding Cs⁺ ion beam over the range 2–16 keV and the different degrees of internal excitation of ions formed in different CI reagent gases are discussed.     

The Analysis of Electronic Structures,NBO, EDA,and QTAIM of trans‐(H3P)2(η2‐BH4 )W(≡C‐para‐C6H4X)(CO) Complexes

In the present research, the impact of substitution on the dipole moment, electronic structure, and frontier orbital energy in trans ‐(H₃P )₂(η²‐BH₄ )W(≡C‐para ‐C₆H₄X )(CO ) complexes (X = H, F, SiH₃ , CN , NO₂ , SiMe₃ , CMe₃ , NH₂ , NMe₂ ) was studied with mpw1pw91 quantum chemical computations. The nature of the chemical bond between the trans‐[Cl(η²‐BH₄ )(H₃P ) ₂W ]⁻ and [C‐para ‐C₆H₄X ]⁺ fragments was demonstrated through energy decomposition analysis (EDA ). The percentage composition in terms of the specified groups of frontier orbitals was examined for these complexes to investigate the feature in metal–ligand bonds. Quantum theory of atoms in molecules (QTAIM ) and natural bond orbital (NBO ) analysis were applied to elucidate these complexes’ metal–ligand bonds.     

Mass‐Selected Circular Dichroism of Supersonic‐Beam‐Cooled [D4]‐(R)‐(+)‐3‐Methylcyclopentanone

UV spectroscopy and electronic circular dichroism (ECD) experiments on supersonic‐beam‐cooled deuterated (R)‐(+)‐3‐methylcyclopentanone ([D₄]‐(R)‐(+)‐3‐MCP) have been performed by using a laser mass spectrometer. The spectral resolution not only allowed excitation and CD measurements for single vibronic transitions but also for the rotational P, Q, and R branches of these transitions. The investigated transition showed the largest anisotropy factor ever observed for chiral molecules in the gas phase, which, due to residual saturation of the excited transition, represents only a lower limit for the real anisotropy factor. Furthermore, one‐color (1+1+1) and two‐color (1+1′) resonance‐enhanced multiphoton ionization (REMPI) measurements were performed and the effusive‐beam (room temperature) and supersonic‐beam results for [D₄]‐(R)‐(+)‐3‐MCP were compared. These results allowed a differentiation between single‐step ECD (comparable to conventional ECD) and cumulative ECD (only possible in multiphoton excitation) under supersonic‐beam conditions.     

Microsynthesis and mass spectral study of Chemical Weapons Convention related 2‐alkyl‐1,3,6,2‐dioxathiaphosphocane‐2‐oxides

Chemical Weapons Convention (CWC)‐related compounds where the phosphorus atom is part of a ring have very limited representation in mass spectral libraries and the open literature. Here we report electron ionization (EI), chemical ionization (CI) and electrospray ionization tandem mass spectrometry (ESI‐MSⁿ) spectra and retention indices for 2‐alkyl‐1,3,6,2‐dioxathiaphosphocane‐2‐oxides (alkyl C₁ to C₃) which are new cyclic chemicals covered under the CWC. The EI mass spectra show a pattern of ion fragmentation that is similar to that of other cyclic phosphonates in that loss of the alkylphosphonic acid as a neutral loss is more important than the presence of the protonated alkylphosphonic acid. In contrast to other cyclic phosphonates, the 2‐alkyl‐1,3,6,2‐dioxathiaphosphocane‐2‐oxides show almost no protonated alkylphosphonic acid and as a result the spectra do not carry the same distinctive signature of the phosphorus–carbon bond that is required for the chemical to be covered under the CWC. Copyright © 2008 John Wiley & Sons, Ltd.     

Compositional elucidation of heavy petroleum base oil by GC × GC‐EI/PI/CI/FI‐TOFMS

Comprehensive two‐dimensional gas chromatography (GC × GC) coupled to time‐of‐flight mass spectrometry is a powerful separation tool for complex petroleum product analysis. However, the most commonly used electron ionization (EI) technique often makes the identification of the majority of hydrocarbons impossible due to the exhaustive fragmentation and lack of molecular ion preservation, prompting the need of soft‐ionization energies. In this study, three different soft‐ionization techniques including photo ionization (PI), chemical ionization (CI), and field ionization (FI) were compared against EI to elucidate their relative capabilities to reveal different base oil hydrocarbon classes. Compared with EI (70 eV), PI (10.8 eV) retained significant molecular ion (M^+·) information for a large number of isomeric species including branched‐alkanes and saturated monocyclic hydrocarbons along with unique fragmentation patterns. However, for bicyclic/polycyclic naphthenic and aromatic compounds, EI played upper hand by retaining molecular as well as fragment ions to identify the species, whereas PI exhibited mainly molecular ion signals. On the other hand, CI revealed selectivity towards different base oil groups, particularly for steranes, sulfur‐containing thiophenes, and esters, yielding protonated molecular ions (M + H)⁺ for unsaturated and hydride abstracted ions (M‐H⁺) for saturated hydrocarbons. FI, as expected, generated intact molecular ions (M^+·) irrespective to the base oil chemical classes. It allowed elemental composition by TOFMS with a mass resolving power up to 8000 (FWHM) and a mass accuracy of 1 mDa, leading to the calculation of heteroatomic content, double bond equivalency, and carbon number of the compounds. The qualitative and quantitative results presented herein offer a unique perspective into the detailed comparison of different ionization techniques corresponding to several hydrocarbon classes.     

(1+1) Resonance‐Enhanced Multiphoton Ionization and Photodissociation Study of CS2 via the 1B2 State

(1+1) resonance‐enhanced multiphoton ionization (REMPI) spectra of CS₂ and molecular dissociation dynamics are investigated using a time‐of‐flight mass spectrometer equipped with velocity imaging detection. The REMPI spectra via a linear‐bent →¹B₂( ) transition are acquired in the wavelength range of 208–217 nm. Each ro‐vibrational band profile of the ¹B₂( ) state is deconvoluted to yield the corresponding predissociative lifetime from 0.3 to 3 ps. Upon excitation at 210.25 and 212.54 nm, the resulting images of S⁺ and CS⁺ fragments are analyzed to give individual translational energy distributions, which are resolved into two components corresponding to the CS+S(³P) and CS+S(¹D) channels. The product branching ratios of S(³P)/S(¹D) are evaluated to be 5.7±1.0 and 9.6±2.5 at 210.25 and 212.54 nm, respectively. Despite the difficulty avoiding the effect of multiphoton absorption, the molecular dissociation channel is verified to prevail over the dissociative ionization channel of CS₂. The anisotropy parameters for the triplet and singlet channels are determined to be ～0.8 and 1.1–1.3, respectively, suggesting that the predissociative state should have a bent configuration with a short lifetime.     

Characterization of N‐methylated amino acids by GC‐MS after ethyl chloroformate derivatization

Methylation is an essential metabolic process in the biological systems, and it is significant for several biological reactions in living organisms. Methylated compounds are known to be involved in most of the bodily functions, and some of them serve as biomarkers. Theoretically, all α‐amino acids can be methylated, and it is possible to encounter them in most animal/plant samples. But the analytical data, especially the mass spectral data, are available only for a few of the methylated amino acids. Thus, it is essential to generate mass spectral data and to develop mass spectrometry methods for the identification of all possible methylated amino acids for future metabolomic studies. In this study, all N‐methyl and N,N‐dimethyl amino acids were synthesized by the methylation of α‐amino acids and characterized by a GC‐MS method. The methylated amino acids were derivatized with ethyl chloroformate and analyzed by GC‐MS under EI and methane/CI conditions. The EI mass spectra of ethyl chloroformate derivatives of N‐methyl ( 1–18 ) and N,N‐dimethyl amino acids ( 19–35 ) showed abundant [M‐COOC₂H₅]⁺ ions. The fragment ions due to loss of C₂H₄, CO₂, (CO₂ + C₂H₄) from [M‐COOC₂H₅]⁺ were of structure indicative for 1–18 . The EI spectra of 19–35 showed less number of fragment ions when compared with those of 1–18 . The side chain group (R) caused specific fragment ions characteristic to its structure. The methane/CI spectra of the studied compounds showed [M + H]⁺ ions to substantiate their molecular weights. The detected EI fragment ions were characteristic of the structure that made easy identification of the studied compounds, including isomeric/isobaric compounds. Fragmentation patterns of the studied compounds ( 1–35 ) were confirmed by high‐resolution mass spectra data and further substantiated by the data obtained from ¹³C₂‐labeled glycines and N‐ethoxycarbonyl methoxy esters. The method was applied to human plasma samples for the identification of amino acids and methylated amino acids. Copyright © 2016 John Wiley & Sons, Ltd.     

Differentiation of Boc‐protected α,δ‐/δ,α‐ and β,δ‐/δ,β‐hybrid peptide positional isomers by electrospray ionization tandem mass spectrometry

Two new series of Boc‐N‐α,δ‐/δ,α‐ and β,δ‐/δ,β‐hybrid peptides containing repeats of L ‐Ala‐δ⁵‐Caa/δ⁵‐Caa‐L ‐Ala and β³‐Caa‐δ⁵‐Caa/δ⁵‐Caa‐β³‐Caa (L ‐Ala = L ‐alanine, Caa = C‐linked carbo amino acid derived from D ‐xylose) have been differentiated by both positive and negative ion electrospray ionization (ESI) ion trap tandem mass spectrometry (MS/MS). MSⁿ spectra of protonated isomeric peptides produce characteristic fragmentation involving the peptide backbone, the Boc‐group, and the side chain. The dipeptide positional isomers are differentiated by the collision‐induced dissociation (CID) of the protonated peptides. The loss of 2‐methylprop‐1‐ene is more pronounced for Boc‐NH‐L ‐Ala‐δ‐Caa‐OCH₃ (1), whereas it is totally absent for its positional isomer Boc‐NH‐δ‐Caa‐L ‐Ala‐OCH₃ (7), instead it shows significant loss of t‐butanol. On the other hand, second isomeric pair shows significant loss of t‐butanol and loss of acetone for Boc‐NH‐δ‐Caa‐β‐Caa‐OCH₃ (18), whereas these are insignificant for its positional isomer Boc‐NH‐β‐Caa‐δ‐Caa‐OCH₃ (13). The tetra‐ and hexapeptide positional isomers also show significant differences in MS² and MS³ CID spectra. It is observed that ‘b’ ions are abundant when oxazolone structures are formed through five‐membered cyclic transition state and cyclization process for larger ‘b’ ions led to its insignificant abundance. However, b₁⁺ ion is formed in case of δ,α‐dipeptide that may have a six‐membered substituted piperidone ion structure. Furthermore, ESI negative ion MS/MS has also been found to be useful for differentiating these isomeric peptide acids. Thus, the results of MS/MS of pairs of di‐, tetra‐, and hexapeptide positional isomers provide peptide sequencing information and distinguish the positional isomers. Copyright © 2010 John Wiley & Sons, Ltd.     

Electron ionization and electrospray ionization mass spectrometric study of a series of isomeric N‐chloro(or bromo)benzyl‐substituted (E)‐2′(3′‐ or 4′)‐hydroxy‐4‐stilbazole halides

The electron ionization (EI) mass spectra and electrospray ionization (ESI) mass spectra of a series of isomeric N‐chlorobenzyl‐ and N‐bromobenzyl‐substituted (E)‐2′(3′ or 4′)‐hydroxy‐4‐stilbazole chlorides and bromides (1–12) were recorded. The fragmentation pathways of all of the compounds and the characteristic fragment ions formed by EI‐MS were studied by means of B/E and B²/E constant linked‐scanning techniques. The formation of ions originating from preionization reactions, characteristic of quaternary halides under EI‐MS conditions, such as the elimination of chloro‐ or bromobenzyl halides, dehydrohalogenation or substitution reactions, is explained. As soft ionization methods cause no such degradation reactions, the ESI‐MS spectra of the studied compounds were also obtained for comparison. We thus demonstrated the applicability of EI‐MS even in cases when preionization takes place, as long as such secondary processes are properly accounted for. Copyright © 2010 John Wiley & Sons, Ltd.