Exploring antibiotic resistance based on enzyme hydrolysis by microcalorimetry

In an effort to understand the reactions of antibiotics hydrolysis with metallo-β-lactamases (MβLs), the thermokinetic parameters of cefazolin hydrolysis with B1 subclass MβL CcrA from Bacteroides fragilis were determined by microcalorimetric method. The values of activation free energy $ \Updelta G_{ \ne }^{\theta } $ are 88.032 ± 0.038, 89.075 ± 0.025, 90.095 ± 0.034, and 91.261 ± 0.044 kJ mol^?1 at 293.15, 298.15, 303.15, and 308.15 K, respectively, the activation enthalpy $ \Updelta H_{ \ne }^{\theta } $ is 25.278 ± 0.005 kJ mol^?1, the activation entropy $ \Updelta S_{ \ne }^{\theta } $ is ?213.99 ± 0.14 J mol^?1 K^?1, the apparent activation energy E is 27.776 kJ mol^?1, and the reaction order is 1.4. The results indicated that the cefazolin hydrolysis with CcrA is an exothermic and spontaneous reaction. An association between the thermokinetic and kinetic parameters was revealed, which is that the catalytic constant K _cat increase with increase in $ \Updelta H_{ \ne }^{\theta } $ .     

Experimental and theoretical evidence suggests carbamate intermediates play a key role in CO2 sequestration catalysed by sterically hindered amines

The chemisorption of CO₂ by aqueous-hindered amines has been investigated experimentally and theoretically. Negative-ion ESI–MS analysis of solutions containing a sterically hindered amine and a source of ¹³CO₂ reveals peaks corresponding to [M–H + 45]^?. These ions readily lose 45 Da when subjected to collisional activation, and together with other key fragments confirms the generation of the ¹³C-labelled carbamate derivatives. The thermochemistry of the two key capture reactions: $$2.{\text{amine }} + {\text{ CO}}_{ 2} { \leftrightarrows }{\text{amine}} - {\text{CO}}_{ 2}^{ - } + {\text{ amine}} - {\text{H}}^{ + } {\kern 1pt} \quad 1:{\text{carbam}}$$ $${\text{amine }} + {\text{ CO}}_{ 2} + {\text{ H}}_{ 2} {\text{O}}{ \leftrightarrows }{\text{HCO}}_{ 3}^{ - } + {\text{ amine}} - {\text{H}}^{ + } \quad 2:{\text{ bicarb}}$$ at 298 K was modelled using composite chemistry methods, CCSD(T), DFT, and SM8 free energies of solvation. The aqueous reaction free energies (ΔG ₂₉₈) for reaction 1 are predicted to be more negative than ΔG ₂₉₈ for reaction 2 when amine = ammonia, 2-aminoethanol (MEA), 2-amino-2-methyl-1-propanol (AMP), 2-amino-2-hydroxymethyl-propane-1,3-diol (tris), and 2-piperidinemethanol (2-PM). For AMP, tris, and 2-PM, activation free energies ΔG ₂₉₈ ^? for reaction 1 (SM8 + CCSD(T)/6-311 ++G(d,p)//M08-HX/MG3S: 38–67 kJ mol^?1) are smaller than the corresponding values for 2 (109–113 kJ mol^?1). For 2-PM, the computed carbamate ΔG ₂₉₈ ^? (38 kJ mol^?1) is comparable to the MEA value (45 kJ mol^?1), whereas the primary amines with tertiary alpha carbons have slightly larger values (60–70 kJ mol^?1). The organic amine values are much lower than the value for ammonia (93 kJ mol^?1). The results indicate CO₂ chemisorption proceeds via a carbamate intermediate for all aqueous primary and secondary amines. Hindered carbamates are susceptible to further chemical transformations following their formation.     

Thermochemical investigation of natural antlerite

Thermal and thermochemical investigations of natural hydroxyl-bearing copper sulfate Cu₃SO₄(OH)₄??antlerite have been carried out. The stages of its thermal decomposition have been studied employing the Fourier-transform IR spectroscopy. The enthalpy of formation of antlerite from the elements ??_f H _m ^o (298.15?K)?=?(?1750?±?10)?kJ?mol^?1 has been determined by the method of oxide melt solution calorimetry. Using value of S _m ^o (298.15?K), equal to (263.46?±?0.47)?J?K^?1?mol^?1, obtained earlier by the method of adiabatic calorimetry, the Gibbs energy value of ??_f G _m ^o (298.15?K)?=?(?1467?±?10)?kJ?mol^?1 has been calculated.     

Low-temperature thermodynamic properties of L- and DL-valines

Heat capacities C _p(T) of L-valine and DL-valine were measured in the temperature range 6–300 K with an adiabatic calorimeter; thermodynamic functions were calculated based on these measurements. At 298.15 K, the values of heat capacity, C _p; entropy, S _m ⁰ (T) ? S _m ⁰ (0); enthalpy, H _m ⁰ (T) ? H _m ⁰ (0) of L-valine are equal, respectively, to 167.9 ± 0.3 J K^?1 mol^?1; 178.5 ± 0.4 J K^?1 mol^?1; and 27510 ± 60 J mol^?1. For DL-valine, these values are equal, respectively, to 167.3 ± 0.3 J K^?1 mol^?1, 174.4 ± 0.3 J K^?1 mol^?1, and 27000 ± 50 J mol^?1. The difference between the heat capacities of enantiomer and racemate has been calculated and compared with the similar data for serines, cysteines, and phenylglycines.     

The electrochemical Peltier heats of Fe(CN) 6 3− /Fe(CN) 6 4− system at 295.15 K

A specially designed thermo-electrochemical calorimeter was applied to measure the electrochemical Peltier heats (EPH) of Fe(CN) ₆ ^3?/4? system at 295.15 K. The curves of the electrode potential changes and temperature changes against time for Fe(CN) ₆ ^3?/4? couple with five groups of different concentrations were obtained under the condition of various constant-current polarizations. The EPH values for the considered electrode reaction are determined to be ?41.31, ?42.73, ?44.28, ?45.87, and ?46.65 kJ mol^?1 at the respective concentrations of 0.125, 0.175, 0.225, 0.275, and 0.300 mol dm^?3; and the EPH and the apparent enthalpy change corresponding to the infinite dilution to be ?37.42 and ?84.10 kJ mol^?1 at 295.15 K, respectively.     

Exploring antibiotic resistant mechanism by microcalorimetry

In an effort to probe the reaction of antibiotic hydrolysis catalyzed by B3 metallo-??-lactamase (M??L), the thermodynamic parameters of penicillin G hydrolysis catalyzed by M??L L1 from Stenotrophomonas maltophilia were determined by microcalorimetric method. The values of activation free energy ??G _?? ^?? are 88.26, 89.44, 90.49, and 91.57?kJ?mol^?1 at 293.15, 298.15, 303.15, and 308.15?K, respectively, activation enthalpy ??H _?? ^?? is 24.02?kJ?mol^?1, activation entropy ??S _?? ^?? is ?219.2511?J?mol^?1?K^?1, apparent activation energy E is 26.5183?kJ?mol^?1, and the reaction order is 1.0. The thermodynamic parameters reveal that the penicillin G hydrolysis catalyzed by M??L L1 is an exothermic and spontaneous reaction.     

Gas-phase reactions between O−. and C6H5F: On the acidity of fluorobenzene and 1,4-difluorobenzene

The gas-phase reactions of negative ions (O^-., NH ₂ ^? , C₂H₅NH^?, (CH₃)₂N^?, C₆H ₅ ^t- , and CH₃SCH ₂ ^? ) with fluorobenzene and 1,4-difluorobenzene have been studied with Fourier transform ion cyclotron resonance mass spectrometry. The O^?. ion reacts predominantly by (1) proton abstraction, (2) formal H ₂ ^+. abstraction, and (3) attack on an unsubstituted carbon atom. In addition to these processes, attack on a fluorine bearing carbon atom yielding F^? and C₆H₄FO^? ions occurs with 1,4-difluorobenzene. Site-specific deuterium labeling reveals the occurrence of competing 1,2-, 1,3-, and 1,4-H ₂ ^+. abstractions in the reaction of O^?. with fluorobenzene. Attack of the O^?. ion on the 3- and 4-positions in fluorobenzene with formation of the 3- and 4-fluorophenoxide ions, respectively, is preferred to reaction at the 2-position, as indicated by the relative extent of loss of a hydrogen and a deuterium atom in the reactions with labeled fluorobenzenes. The NH ₂ ^? , C₂H₅NH^?, (CH₃)₂N^?, C₆H ₅ ^? , and CH₃SCH ₂ ^? anions react with fluoroberuene and 1,4-difluorobenzene only by proton abstraction. The relative importance of H⁺ and D⁺ abstraction in the reaction of these anions with labeled fluorobenzenes indicates that the 2-position in fluorobenzene is more acidic than the 3- and 4-positions, suggesting that the literature value of the gas-phase acidity of this compound (ΔH _acid ^o = 1620 ± 8 kJ mol^?1) refers to the former site. Based on the occurrence of reversible proton transfer between the CH₃O^? ion and 1,4-difluorobenzene, the ΔH _acid ^o of this compound is redetermined to be 1592 ± 8 kJ mol^?1.     

Nucleophilic assistance in methane activation by superelectrophiles with halogen-centered cationic sites

Simulation of fragments of potential energy surface for systems CH₄ + CBr ₃ ⁺ , CH₄ + CBr ₃ ⁺ AlBr ₄ ^? , CH₄ + CCl ₃ ⁺ AlCl ₄ ^? , and CH₄ + CCl ₃ ⁺ Al₂Cl ₇ ^? was performed by DFT-B3LYP and DFT-PBE methods. The important role of nucleophilic assistance in methane halogenation by these superelectrophiles was confirmed. These reactions occur with a synchronous hydride transfer from methane to the electrophile within the cyclic transition states in linear C-H-C fragment of the rings and a generation of a C-Hlg bond between the carbon atom of the arising methyl group and the halogen atom of the electrophile. The nucleophilic assistance from the unshared electron pair of this halogen atom provides the lowering of the potential barriers to methane halogenation by complexes CBr ₃ ⁺ AlBr ₄ ^? , CCl ₃ ⁺ AlCl ₄ ^? , and CCl ₃ ⁺ Al₂Cl ₇ ^? to the values of the order of 20 kcal mol^?1. These essential features of the mechanism of methane halogenation are independent of the halogen nature and are retained on going from the model electrophiles to the real ones.     

The research on formation enthalpy of phenanthroline monohydrate and its influence on the growth metabolism of E. coli by microcalorimetry

A precision rotating-bomb combustion calorimeter (thermistor of which was constructed in the laboratory) was calibrated using benzoic acid with purity of 99.999 %. The combustion energy of phenanthroline monohydrate (phen·H₂O) at 298.15 K was determined to be Δ_c U _m ^θ  = ?(5,757.45 ± 2.53) kJ mol^?1. Then, the standard enthalpy of combustion and the standard enthalpy of formation of phen·H₂O were calculated to be Δ_c H _m ^θ  = ?(5,759.93 ± 2.53) kJ mol^?1 and Δ_f H _m ^θ  = ?(391.34 ± 2.98) kJ mo1^?1, respectively. Particularly, the effect of phen·H₂O on growth and metabolism of Escherichia coli (E. coli) was also determined by a TAM air isothermal calorimeter at 37 °C. The thermokinetic parameters, including maximum heat output power (P _max), growth rate constant (κ), generation times (t _G), inhibitive rate (I), and half inhibition concentration (C _I,50), were obtained. The results showed that phen·H₂O possessed the bi-directional biological effect and Hormesis effect, which stimulated the growth of E. coli at lower concentration, but inhibited the growth at higher concentration. The half inhibition concentration C _I,50 of phen·H₂O was found to be 7.31 mg L^?1.     

Thermal study on decomposition of LiBH4 at non-isothermal and non-equilibrium conditions

Thermal decomposition measurements for lithium borohydride (LiBH₄) are performed at non-isothermal and non-equilibrium conditions by means of differential thermal analysis (DTA). A simplified alternative procedure is introduced for evaluating thermodynamic and kinetic parameters simultaneously using a single set of measurements. Rate constant (k) and enthalpy (ΔH = ?102.1 ± 0.7 kJ mol^?1 LiBH₄) are archived. Temperature dependence for activation energy (E _a) is found taking advantage of Guggenheim–Arrhenius method; the mean activation energy is $ \overline{E}_{a} $  93.9 ± 0.9 kJ mol^?1 LiBH₄ in the range of heating rate β 1–50 K min^?1.     

Heat capacities and standard molar enthalpy of formation of pyrimethanil maleic salt and pyrimethanil fumaric salt

Novel anilino-pyrimidine fungicides, pyrimethanil maleic salt, and pyrimethanil fumaric salt (C₂₈H₃₀N₆O₄) were synthesized by a chemical reaction of pyrimethanil with maleic acid/fumaric acid. The low-temperature heat capacities of the two compounds were measured with an adiabatic calorimeter from 80 to 350 K. The heat capacities of pyrimethanil fumaric salt are bigger than that of pyrimethanil maleic salt in the measurement temperature range. The thermodynamic function data relative to 298.15 K were calculated based on the heat capacity-fitted curves. The melting points, the molar enthalpies (Δ_fus H _m), and entropies (Δ_fus S _m) of fusion of pyrimethanil maleic salt and pyrimethanil fumaric salt were determined from their DSC curves. The values indicate that pyrimethanil fumaric salt was more thermostable than pyrimethanil maleic salt. The constant-volume energies of combustion (Δ_c U _m ^o ) of pyrimethanil maleic salt and pyrimethanil fumaric salt were measured using an isoperibol oxygen bomb combustion calorimeter at T = (298.15 ± 0.001) K. From the Hess thermochemical cycle, the standard molar enthalpies of formation of the two compounds were derived and determined to be Δ_f H _m ^o (pyrimethanil maleic salt) = ?459.3 ± 4.9 kJ mol^?1 and Δ_f H _m ^o (pyrimethanil fumaric salt) = ?557.2 ± 4.8 kJ mol^?1, respectively. The results suggest that pyrimethanil fumaric salt is more chemically stable than pyrimethanil maleic salt.     

Radical-induced destruction of diethyl phthalate in aqueous solution: kinetics, spectral properties, and degradation efficiencies studies

In this work, the reactions of ^?OH, e _aq ^? , and SO ₄ ^?? with diethyl phthalate (DEP) were investigated in aqueous solution by pulse radiolysis, and degradation efficiencies of DEP with ^?OH and e _aq ^? were evaluated in water using steady-state radiolysis as well. The absolute rate constants of ^?OH, e _aq ^? , and SO ₄ ^?? with DEP were determined as 2.3 × 10⁹, 1.0 × 10¹⁰, and 1.0 × 10⁸ M^?1 s^?1, respectively. The degradation efficiencies for the ^?OH and e _aq ^? reactions were 81 and 33 %, respectively. Transient absorption spectra were observed for the intermediate radicals produced by ^?OH, e _aq ^? , and SO ₄ ^?? reactions. The results suggested that e _aq ^? transferred to the ester group, resulting in the formation of DEP radical anions. In contrast, ^?OH and SO ₄ ^?? added predominantly to the aromatic ring of DEP, forming the corresponding ^?OH adducts. The fundamental mechanistic parameters and degradation efficiencies derived from these results were significant for evaluations and applications of advanced oxidation processes.     

The Standard Chemical-Thermodynamic Properties of Phosphorus and Some of its Key Compounds and Aqueous Species: An Evaluation of Differences between the Previous Recommendations of NBS/NIST and CODATA

The aqueous chemistry of phosphorus is dominated by P(V), which under typical environmental conditions (and depending on pH and concentration) can be present as the orthophosphate species H₃PO ₄ ⁰ (aq),H₂PO ₄ ^? (aq),HPO ₄ ^2? (aq) or PO ₄ ^3? (aq). Many divalent, trivalent and tetravalent metal ions form sparingly soluble orthophosphate phases that, depending on the solution pH and concentrations of phosphate and metal ions, can be solubility limiting phases. Geochemical and chemical engineering modeling of solubilities and speciation require comprehensive thermodynamic databases that include the standard thermodynamic properties for the aqueous species and solid compounds. The most widely used sources for standard thermodynamic properties are the NBS (now NIST) Tables (from 1982 and earlier, with a 1989 erratum) and the final CODATA evaluation (1989). However, a comparison of the reported enthalpies of formation and Gibbs energies of formation for key phosphate compounds and aqueous species, especially H₂PO ₄ ^? (aq) and HPO ₄ ^2? (aq), shows a systematic and nearly constant difference of 6.3 to 6.9 kJ?mol^?1 per phosphorus atom between these two evaluations. The existing literature contains numerous studies (including major data summaries) that are based on one or the other of these evaluations. In this report we examine and identify the origin of this difference and conclude that the CODATA evaluation is more reliable. Values of the standard entropies of the H₂PO ₄ ^? (aq) and HPO ₄ ^2? (aq) ions at 298.15 K and p?° =1 bar were re-examined in the light of more recent information and data not considered in the CODATA review, and a slightly different value of S _m ^o (H₂PO ₄ ^? , aq, 298.15 K) = (90.6±1.5) J?K^?1?mol^?1 was obtained.     

Thermodynamic analysis of the structure of aqueous solutions of C<Subscript>12</Subscript>–C<Subscript>18</Subscript> hydrocarbons

Thermodynamic cycles including the increments \(\Delta G_{CH_2 }^0 , \Delta H_{CH_2 }^0 \), and \(T\Delta S_{CH_2 }^0 \) were constructed for dissolution, evaporation, hydrophobic hydration of C₅–C₉ hydrocarbons, and transfer from vapor (\(\Delta G_{CH_2 }^0 \) = ?0.7 kJ·mol^?1, \(\Delta H_{CH_2 }^0 \) = 2.9 kJ·mol^?1, \(T\Delta S_{CH_2 }^0 \) = 3.6 kJ·mol^?1) and water (\(\Delta G_{CH_2 }^0 \) = ?1.4 kJ·mol^?1, \(\Delta H_{CH_2 }^0 \) = 5.8 kJ·mol^?1, \(T\Delta S_{CH_2 }^0 \) = 7.2 kJ·mol^?1) to micelles of C₁₂–C₁₈ hydrocarbons. The formation of bistable hydrated micelles of C₁₂–C₁₈ is explained by a transition between the order-disorder states in an assembly of small (nano) systems of water. The extensive parameters of small systems and critical phenomena predicted by fluctuation theory are discussed.     

Gemischt quantenmechanisch-statistische Modellrechnungen nach der Einzentrenmethode an Wasserstoffverbindungen tetraedrischer Symmetrie von Elementen der III., IV. und V. Hauptgruppe

Using a one-center-method, treating the inner shells statistically, the valence-shell, however, by quantum mechanics, the equilibrium internuclear distances and total molecular energies have been computed for CH₄, SiH₄, GeH₄, SnH₄, PbH₄, BH ₄ ^? , AlH ₄ ^? , GaH ₄ ^? , InH ₄ ^? , TlH ₄ ^? , NH ₄ ⁺ , PH ₄ ⁺ , AsH ₄ ⁺ , SbH ₄ ⁺ , and BiH ₄ ⁺ . The results are in good agreement with experimental data as well as with theoretical values.     

Kinetics and mechanism of the oxidation of tris(2,2′-bipyridine)iron(II) and tris(1,10-phenanthroline)iron(II) complexes by nitropentacyanocobaltate(III) in acidic aqueous medium

The kinetics of the oxidation of tris(2,2′-bipyridyl)iron(II) and tris(1,10-phenanthroline)iron(II) complexes ([Fe(LL)₃]²⁺, LL = bipy, phen) by nitropentacyanocobaltate(III) complex [Co(CN)₅NO₂]^3? was investigated in acidic aqueous solutions at ionic strength of I = 0.1 mol dm^?3 (HCl/NaCl). The reactions were carried out at fixed acid concentration ([H⁺] = 0.01 mol dm^?3) and the temperature maintained at 35.0 ± 0.1 °C. Spectroscopic evidence is presented for the protonated oxidant. Protonation constants of 360.43 and 563.82 dm³ mol^?1 were obtained for the monoprotonated and diprotonated Co(III) complexes respectively. Electron transfer rates were generally faster for [Fe(bipy)₃]²⁺ than [Fe(phen)₃]²⁺. The redox complexes formed ion-pairs with the oxidant with increasing concentration of the oxidant over that of the reductant. Ion-pair constants for these reaction were 160.31 and 131.9 dm³ mol^?1 for [Fe(bipy)₃]²⁺ and [Fe(phen)₃]^2+, respectively. The activation parameters measured for these systems have values as follows: ?H ^≠ (kJ K^?1 mol^?1) = +113.4 ± 0.4 and +119 ± 0.3; ?S ^≠ (J K^?1) = +107.6 ± 1.3 and 125.0 ± 1.6; ?G ^≠ (kJ K^?1) = +81 ± 0.4 and +82.4 ± 0.4; and E _a (kJ mol^?1) = 115.9 ± 0.5 and 122.3 ± 0.6 for LL = bipy and phen, respectively. Effect of added anions (Cl^?, $ {\text{SO}}_{4}^{2 - } $ and $ {\text{ClO}}_{4}^{ - } $ ) on the systems showed decrease in the electron transfer rate constant. An outer-sphere mechanism is proposed for the reaction.     

Octadecylamine cobalt(III) dimethyl glyoximato complexes: synthesis,thermodynamics of micellization,steady-state photolysis and biological activities

A new class of surfactant–cobalt(III) complexes of the type trans-[Co(DH)₂(OA)X], where DH = dimethylglyoxime, OA = octadecylamine, X = Cl^?, Br^?, I^?, N₃ ^?, NO₂ ^?, SCN^? or OA, were synthesized and characterized by physicochemical and spectroscopic methods. The critical micelle concentration (CMC) values of these surfactant–cobalt(III) complexes in ethanol solution were obtained by measuring absorption at ~250 nm. Specific conductivity data (at 303–313 K) served for the evaluation of the temperature-dependent CMC and the thermodynamics of micellization (ΔG _m ⁰ , ΔH _m ⁰ and ΔS _m ⁰ ). Steady-state photolysis and cyclic voltammetry of the complexes were studied. The surfactant–cobalt(III) complexes were screened for their antibacterial and antifungal activities against various microorganisms.     

Extraction-photometric selective determination of trace perchlorates in potable waters

A method is proposed for the selective photometry determination of perchlorates in potable water with a detection limit of 2×10^?3 mg/L is proposed based on the extraction of its ion pair with the astrafloxin cation and absorbance measurements at 540 nm. The following ratios of matrix ions are acceptable (in parentheses): ClO^?, ClO ₂ ^? , ClO ₃ ^? , BrO ₃ ^? (500); I^? (1000); IO ₃ ^? (7000); HCO ₃ ^? , Cl^?,SO ₄ ^2? , NO ₃ ^? , Br^?, Na⁺, K⁺, Ca²⁺, Mg²⁺ (10000). The relative error of determination for ClO ₄ ^? is 20% in the range 4 × 10^-3-1 × 10^?2 mg/L and 10% in the range 1 × 10^-2–5 × 10^?2 mg/L.     

Boric acid

pH ranges of existence of boric acid and its ionic species H₂BO ₃ ^? , HBO ₃ ^2? , BO ₃ ^3? , and B(OH) ₄ ^? in aqueous solutions are calculated using Mathcad software package.     

Crystal structure and standard molar enthalpy of formation of ethylenediamine dilauroleate (C12H24O2)2C2N2H8(s)

The crystal structure of ethylenediamine dilauroleate was determined by X-ray crystallography. A thermochemical cycle was designed in accordance with Hess law. The enthalpy change of the synthesis reaction of ethylenediamine dilauroleate was determined to be $ \Updelta_{{\text{r}}} H_{{\text{m}}}^{\Uptheta } $ Δ r H m Θ  = ?(49.07 ± 0.11) kJ mol^?1 by an isoperibol solution–reaction calorimeter. The standard molar enthalpy of formation of the title compound was calculated to be $ \Updelta_{\text{f}} H_{\text{m}}^{\Uptheta } $ Δ f H m Θ  = ?(38.78 ± 0.43) kJ mol^?1 by the designed thermochemical cycle, the enthalpies of dissolution and other auxiliary thermodynamic quantities.