Synthesis of Water-Soluble Polyammonium Thiacalix[4]arene Derivative and Its Interaction with Calf Thymus DNA

A water-soluble thiacalix[4]arene derivative containing four diethylenetriamine fragments in 1,3-alternate stereoisomeric form has been obtained for the first time. Using ethidium bromide, it has been found that the macrocycle can interact with calf thymus DNA. The macrocycle has been found to interact with DNA via groove binding. The presence of four diethylenetriamine fragments on the calixarene platform leads to multivalent interactions with DNA, resulting in an increase in the binding constant by two orders of magnitude compared to individual diethylenetriamine.     

Neutral pi-associated porphyrin [2]catenanes

A series of neutral porphyrin-containing catenanes has been synthesised, consisting of a zinc porphyrin strapped by a polyethylene glycol chain containing four or six ethylenoxy-units and incorporating a central naphthoquinol unit, interlinked with a naphthalene diimide macrocycle. The napthalene diimide precursor units exhibit only weak binding with the strapped porphyrins (Ka between 8 and 0.02 M(-1)), but good yields of the catenanes were obtained by Glaser coupling of the alkynyl napthalene diimide precursors in the presence of the porphyrins. Structures and solution conformations were determined by mass spectral and detailed 1H NMR studies. For the longer strapped porphyrins, the diimide macrocycle rotates around the central naphthoquinol unit at 420-450 times per second, while rotation is virtually prevented in the tighter strapped derivatives. A second dynamic process occurring in both sets of catenanes and described as 'yawing' leads to inequivalence in the naphthalene moieties. UV-Visible spectra indicate charge transfer interactions and electronic communication between the two components of the catenane.     

Synthesis and study of a cyclophane displaying dual fluorescence emission: a novel ratiometric sensor for carboxylic acids in organic medium

The synthesis and fluorescent properties of a novel cyclophane containing two l-valine units and one naphthalene chromophore are described. Synthesis of the macrocycle 1 was accomplished without using high-dilution methods in moderate to high yields. The fluorescence spectrum of 1 in neutral dichloromethane shows a band at 390 nm attributable to emission from an exciplex formed between the naphthalene unit and the neighboring amine groups. Addition of trifluoroacetic acid restores the typical naphthalene emission at 330 nm. Due to the fact that both emissions have similar intensities under the working conditions, the ratio between them can be used to obtain a ratiometric response to carboxylic acids in organic medium.     

Tautomerization in naphthalenediimines: a keto-enamine Schiff base macrocycle

[reaction: see text] A new [3 + 3] Schiff base macrocycle incorporating naphthalene groups has been prepared. By examination of its properties, X-ray crystallography of model compounds, and calculations, it has been determined that the macrocycle exists predominantly as the keto-enamine tautomer. This unexpected tautomerization presents an unusual hexaketo interior in the macrocycle.     

An acyclic phane receptor with a pair of disulfonaphthalene arms recognizing 2,3-trans-gallate-type catechins in water

In order to develop a receptor molecule for recognizing differences in catechin structures, complexation between catechins and a water-soluble acyclic phane composed of an isophthalate and two aminodisulfonaphthalenes was investigated with ¹H NMR spectroscopy. The phane receptor formed 1:1 complexes with the catechins and showed preferential binding ability for the 2,3-trans-gallate-type catechin. The binding studies demonstrated the length of naphthalene framework required to form a hydrophobic environment for the complexation.     

Column preconcentration of titanium in aluminium and zinc alloys with oxalic acid-ascorbic acid and the ion-pair of sodium 1,2-dihydroxybenzene-3,5-disulphonic acid and tetradecyldimethylbenzylammonium chloride supported on naphthalene using spectrometry

A solid ion-pair compound produced from sodium 1,2-dihydroxybenzene-3,5-disulphonic acid (Tiron) and tetradecyldimethylbenzylammonium chloride(TDBA) supported on naphthalene in a simple glass-tipped funnel tube provides a simple adsorbent system for preconcentrating titanium from some alloys. Titanium reacts with Tiron to form a water-soluble coloured chelate anion which in turn forms a water-insoluble stable titanium/Tiron/TDBA complex with the ion-pair on the surface of naphthalene packed in a column. Titanium is quantitatively retained on the naphthalene in the presence of L-ascorbic acid and oxalic acid in the pH range 3.0-4.5 and at a flow-rate of 1 mil/min. The metal complex and naphthalene were dissolved from the column with 5 ml of dimethylformamide(DMF), and the absorbance of the solution was measured at 398 nm. A calibration graph was linear over the range 1-18 mug of titanium in 5 ml of the final DMF solution. The complex has a molar absorptivity of 1.39 x 10(4) l.mole(-1).cm(-1) and a sensitivity of 3.44 x 10(-3) mug/cm(2) for 0.001 absorbance. Eight replicate determinations for a sample containing 12 mug of titanium gave a mean absorbance of 0.697 with a relative standard deviation of 0.82%. The interference of various ions was studied and optimum conditions were developed for the determination of titanium in various aluminium and zinc alloys.     

Synthesis of trinuclear Cu<Superscript>II</Superscript>-complex with tris(4-triphenylmethylphenoxy)-substituted hemihexaphyrazine and radioprotective properties of its water-soluble form

A condensation of 2,5-diamino-1,3,4-thiadiazole with the products of the in situ reaction of 1,2-dicyano-4-(4-triphenylmethylphenoxy)benzene with sodium alkoxides in a mixture of butanol—methanol furnished a trisubstituted ABABAB-type macroheterocycle (hemihexaphyrazine). A 3 : 1 trinuclear complex was synthesized by the reaction of the macrocycle with copper(II) acetate. The compounds obtained were characterized by IR spectroscopy, UV-vis spectroscopy, mass spectrometry, as well as by elemental analysis. Radioprotective properties of the water-soluble form of the complex were studied     

Three state redox-active molecular shuttle that switches in solution and on a surface

Although the desirability of developing synthetic molecular machine systems that can function on surfaces is widely recognized, to date the only well-characterized examples of electrochemically switchable rotaxane-based molecular shuttles which can do so are based on the tetracationic viologen macrocycle pioneered by Stoddart. Here, we report on a [2]rotaxane which features succinamide and naphthalene diimide hydrogen-bonding stations for a benzylic amide macrocycle that can shuttle and switch its net position both in solution and in a monolayer. Three oxidation states of the naphthalene diimide unit can be accessed electrochemically in solution, each one with a different binding affinity for the macrocycle and, hence, corresponding to a different distribution of the rings between the two stations in the molecular shuttle. Cyclic voltammetry experiments show the switching to be both reversible and cyclable and allow quantification of the translational isomer ratios (thermodynamics) and shuttling dynamics (kinetics) for their interconversion in each state. Overall, the binding affinity of the naphthalene diimide station can be changed by 6 orders of magnitude over the three states. Unlike previous electrochemically active amide-based molecular shuttles, the reduction potential of the naphthalene diimide unit is sufficiently positive (-0.68 V) for the process to be compatible with operation in self-assembled monolayers on gold. Incorporating pyridine units into the macrocycle allowed attachment of the shuttles to an acid-terminated self-assembled monolayer of alkane thiols on gold. The molecular shuttle monolayers were characterized by X-ray photoelectron spectroscopy and their electrochemical behavior probed by electrochemical impedance spectroscopy and double-potential step chronoamperometry, which demonstrated that the redox-switched shuttling was maintained in this environment, occurring on the millisecond time scale.     

Synthesis and complexation of a ‘mixed’-pyridine-naphthalene homooxacalixarene

A deep-cavity ‘mixed’ octahomotetraoxacalix[2]naphthalene[2]pyridine macrocycle has been synthesised and its single-crystal X-ray structure has been determined. Molecular modeling studies suggested that this macrocycle could be an effective host for guest aromatic diol(s) similar to Wang's methylazacalixpyridines. Binding constants were determined using ¹H NMR chemical shifts changes and comparisons were made between the diols which were tested.     

Synthetic studies toward sarain A. Formation of the western macrocyclic ring

Starting with the tricyclic core 2b, annulation to form the 13-membered western ring of sarain A has been achieved to afford the macrocycle 30a by initial construction of the sterically congested quaternary center at C-3, followed by elaboration of the C-3 side-chain and ring-closing olefin metathesis. Also included is a parallel conversion of tricycle 2c to macrocycle 30b containing a functionalized side-chain at N-1 suitable for attachment of the eastern macrocyclic ring.     

Substrate-Induced Dimerization Assembly of Chiral Macrocycle Catalysts toward Cooperative Asymmetric Catalysis

An artificial system of substrate-induced dimerization assembly of chiral macrocycle catalysts enables a highly cooperative hydrogen-bonding activation network for efficient enantioselective transformation. These macrocycles contain two thiourea and two chiral diamine moieties and dimerize with sulfate to form a sandwich-like assembly. The macrocycles then adopt an extended conformation and reciprocally complement the hydrogen-bonding interaction sites. Inspired by the guest-induced dynamic assembly, these macrocycles catalyze the decarboxylative Mannich reaction of cyclic aldimines containing a sulfamate heading group. The imine substrate can be activated toward nucleophilic attack of β-ketoacid by a cooperative hydrogen-bonding network enabled by sulfamate-induced dimerization assembly of the macrocycle catalysts. Highly efficient (>95 % yield in most cases) and enantioselective (up to 97.5:2.5 er) transformation of a variety of substrates using only 5 mol % macrocycle was achieved.     

A Dual‐Response [2]Rotaxane Based on a 1,2,3‐Triazole Ring as a Novel Recognition Station

Two novel multilevel switchable [2]rotaxanes containing an ammonium and a triazole station have been constructed by a Cu^I‐catalyzed azide–alkyne cycloaddition reaction. The macrocycle of [2]rotaxane containing a C6‐chain bridge between the two hydrogen bonding stations exhibits high selectivity for the ammonium cation in the protonated form. Interestingly, the macrocycle is able to interact with the two recognition stations when the bridge between them is shortened. Upon deprotonation of both [2]rotaxanes, the macrocycle moves towards the triazole recognition site due to the hydrogen‐bond interaction between the triazole nitrogen atoms and the amide groups in the macrocycle. Upon addition of chloride anion, the conformation of [2]rotaxane is changed because of the cooperative recognition of the chloride anion by a favorable hydrogen‐bond donor from both the macrocycle isophthalamide and thread triazole CH proton.     

Hydrogen-bonding induced construction of a multiple double-helical system via a macrocycle-containing propargylamine backbone

Two macrocyclic compounds containing propargylamine backbone have been synthesised via Mannich three-component reaction. The macrocycle 3a shows the intramolecular self-folding conformation. The macrocycle 3b self-assembles via multiple weak interactions to form a multiple double-helical system, which shows the alternate helical handedness.     

A reverse donor-acceptor bistable [2]catenane

A [2]catenane, composed of a pi-electron-rich bis-1,5-dioxynaphthalene[38]crown10 (BDNP38C10) ring, mechanically interlocked with a large macrocycle containing two disubstituted tetraarylmethane "speed bumps" and two different pi-electron-deficient units--namely, naphthalene dimide (NpI) and bipyridinium (BIPY(2+)) units--has been synthesized from a [2]rotaxane, containing the former recognition unit, after performing two sequential Cu(I)-catalyzed azide-alkyne cycloadditions with a linker containing the latter recognition unit. The product, which exists as a single co-conformer, wherein the BDNP38C10 ring encircles the NpI unit, undergoes equilibration to give approximately equal amounts of the other co-conformer in which the BDNP38C10 ring encircles the BIPY(2+) unit.     

Substrate‐Induced Dimerization Assembly of Chiral Macrocycle Catalysts toward Cooperative Asymmetric Catalysis

An artificial system of substrate‐induced dimerization assembly of chiral macrocycle catalysts enables a highly cooperative hydrogen‐bonding activation network for efficient enantioselective transformation. These macrocycles contain two thiourea and two chiral diamine moieties and dimerize with sulfate to form a sandwich‐like assembly. The macrocycles then adopt an extended conformation and reciprocally complement the hydrogen‐bonding interaction sites. Inspired by the guest‐induced dynamic assembly, these macrocycles catalyze the decarboxylative Mannich reaction of cyclic aldimines containing a sulfamate heading group. The imine substrate can be activated toward nucleophilic attack of β‐ketoacid by a cooperative hydrogen‐bonding network enabled by sulfamate‐induced dimerization assembly of the macrocycle catalysts. Highly efficient (>95 % yield in most cases) and enantioselective (up to 97.5:2.5 er) transformation of a variety of substrates using only 5 mol % macrocycle was achieved.     

Electrochemically switchable hydrogen-bonded molecular shuttles

A series of [2]rotaxanes containing succinamide and naphthalimide hydrogen-bonding stations for a benzylic amide macrocycle is described. Electrochemical reduction and oxidation of the naphthalimide group alters its ability to form hydrogen bonds to the macrocycle to such a degree that redox processes can be used to switch the relative macrocycle-binding affinities of the two stations in a rotaxane by over 8 orders of magnitude. The structure of the neutral [2]rotaxane in solution is established by (1)H NMR spectroscopy and shows that the macrocycle exhibits remarkable positional integrity for the succinamide station in a variety of solvents. Cyclic voltammetry experiments allow the simultaneous stimulation and observation of a redox-induced dynamic process in the rotaxane which is both reversible and cyclable. Model compounds in which various conformational and co-conformational changes are prohibited demonstrate unequivocally that the redox response is the result of shuttling of the macrocycle between the two stations. At room temperature in tetrahydrofuran the electrochemically induced movement of the macrocycle between the two stations takes approximately 50 micros.     

Post-Synthesis Conversion of an Unstable Imine Cage to a Stable Cage with Amide Moieties Towards Selective Receptor for Fluoride

Synthesis of robust covalent macrocycles/cages via multiple amide-bond forming reaction is highly challenging and generally it needs multistep reactions. One-pot reaction of appropriate di-/tri-acyl chloride with a diamine generally results polymers or oligomers instead of discrete architectures. To overcome this limitation, a strategy is reported here using dynamic imine chemistry for facile construction of imine-based macrocycle and cage upon treatment of a diamine with di- and tri-aldehydes respectively, followed by post-synthesis one-step conversion of imine bonds to amides to form the desired robust macrocycle and cage containing multiple amide bonds. While the macrocycle was found to form aggregates in DMSO, the cage was intact without any aggregation. Six amide groups in the confined pocket of the cage made it an ideal receptor for selective binding of fluoride with very high selectivity (∼3 10³ fold) over chloride, and it was silent towards other halides, phosphate, and other oxyanions.     

Synthesis of chiral, amphiphilic, and water-soluble macrocycles via urea formation

A simple, efficient, and flexible procedure for the synthesis of chiral, amphiphilic, and water-soluble macrocycles is reported. Acylation of p-xylylenediamine with N^α-Fmoc-protected glycine, l-aspartic acid, l-glutamic acid, and l-arginine, followed by removal of Fmoc-groups, gave amino acid:p-xylylene conjugate diamines, which were converted to ten macrocycles via stepwise urea formation using p-nitrophenyl chloroformate. l-Aspartic acid-containing macrocyles proved to be soluble in aqueous buffers and a macrocycle containing four aspartate residues was found to recognize arginine and arginine esters with moderate affinity.     

pH-controlled fluorescent emission in the nickel(II) complex of a bifunctional tetramine macrocycle

In the Ni(II) complex of a reinforced tetramine macrocycle, equipped with both a sulfonamide pendant arm and a naphthalene fragment, light emission of the fluorophore is pH-controlled, as a result of a change of the geometry of the complex.     

Tetradecyldimethylbenzylammonium thiocyanate adsorbent supported on naphthalene for the preconcentration and determination of cobalt in aluminium alloys and steels using atomic absorption spectrometry

A solid ion-pair material produced from tetradecyldimethylbenzylammonium chloride (TDBA) and ammonium thiocyanate on naphthalene provides a simple, rapid and selective technique of preconcentrating cobalt from up to 200 ml of aqueous solution. Cobalt reacts with sodium 1-nitroso-2-naphthol-3,6-disulphonate (nitroso-R salt) to form a brown, water-soluble chelate anion. The chelate anion forms a water-insoluble Co-nitroso-R salt-TDBA complex on naphthalene packed in a column and trace cobalt is quantitatively retained on the naphthalene in the pH range 2.7–11.0 at a flow-rate of 2 ml min^?1. The solid mass is stripped from the column with 5 ml of dimethylformamide (DMF) and cobalt is measured by atomic absorption spectrometry (AAS) at 241 nm. The calibration graph is linear over the concentration range 0.5–15μg Co in 5 ml of dimethylformamide solution. Seven replicate determinations of 9 μg of cobalt gave a mean absorbance of 0.095 with a relative standard deviation of 1.7%. The sensitivity for 1% absorption was 0.0834μg ml^?1 (0.240 μg ml^?1 for direct AAS on the aqueous solution). The proposed method was utilized for the determination of cobalt in standard aluminium alloys and steel samples.