Oxygen‐Dependent Photochemistry and Photophysics of “MiniSOG,” a Protein‐Encased Flavin

Selected photochemical and photophysical parameters of flavin mononucleotide (FMN) have been examined under conditions in which FMN is (1) solvated in a buffered aqueous solution, and (2) encased in a protein likewise solvated in a buffered aqueous solution. The latter was achieved using the so‐called “mini Singlet Oxygen Generator” (miniSOG), an FMN‐containing flavoprotein engineered from Arabidopsis thaliana phototropin 2. Although FMN is a reasonably good singlet oxygen photosensitizer in bulk water (?_Δ = 0.65 ± 0.04), enclosing FMN in this protein facilitates photoinitiated electron‐transfer reactions (Type‐I chemistry) at the expense of photosensitized singlet oxygen production (Type‐II chemistry) and results in a comparatively poor yield of singlet oxygen (?_Δ = 0.030 ± 0.002). This observation on the effect of the local environment surrounding FMN is supported by a host of spectroscopic and chemical trapping experiments. The results of this study not only elucidate the behavior of miniSOG but also provide useful information for the further development of well‐characterized chromophores suitable for use as intracellular sensitizers in mechanistic studies of reactive oxygen species.     

Reaction Pathways for the Photodegradation of the Organophosphorus Cyanophos in Aqueous Solutions

Photodegradation in aqueous solutions is an important pathway for many agrochemicals such as pesticides. In the present work, the photochemical transformation of cyanophos (CYA) was investigated in aqueous solutions using UV light within the 254–313 nm range as well as solar light. The study was performed in order to have a deep insight into the mechanistic pathways for the photochemical disappearance of CYA. Upon UV irradiation of an aerated solution of CYA, the degradation quantum yield was found equal to 1.8 × 10⁻². It is independent of the excitation wavelength but varies with oxygen concentration. It increased by a factor of 2 from oxygen-saturated to oxygen-free solution. Photosensitized experiments were performed using acrylamide and hydroquinone as energy acceptor and energy donor substrates, respectively. They show that both singlet and triplet excited states were involved in the photochemical behavior of CYA. The laser flash photolysis experiments clearly showed the involvement of the triplet excited state which was efficiently quenched by molecular oxygen and acrylamide with the rate constants 1.97 × 10⁹ and 2.71 × 10⁹ mol⁻¹ L s⁻¹, respectively. The photoproducts structures were proposed according to the mass spectral data using the LC/MS technique. The analytical study shows that various processes such as hydrolysis, homolytic bond dissociations and Photo-Fries process occur.     

The effect of temperature on the stability of compounds used as UV‐MALDI‐MS matrix: 2,5‐dihydroxybenzoic acid, 2,4,6‐trihydroxyacetophenone, α‐cyano‐4‐hydroxycinnamic acid, 3,5‐dimethoxy‐4‐hydroxycinnamic acid,nor‐harmane and harmane

The thermal stability of several commonly used crystalline matrix‐assisted ultraviolet laser desorption/ionization mass spectrometry (UV‐MALDI‐MS) matrices, 2,5‐dihydroxybenzoic acid (gentisic acid; GA), 2,4,6‐trihydroxyacetophenone (THA), α‐cyano‐4‐hydroxycinnamic acid (CHC), 3,5‐dimethoxy‐4‐hydroxycinnamic acid (sinapinic acid; SA), 9H‐pirido[3,4‐b]indole (nor‐harmane; nor‐Ho), 1‐methyl‐9H‐pirido[3,4‐b]indole (harmane; Ho), perchlorate of nor‐harmanonium ([nor‐Ho + H]⁺) and perchlorate of harmanonium ([Ho + H]⁺) was studied by heating them at their melting point and characterizing the remaining material by using different MS techniques [electron ionization mass spectrometry (EI‐MS), ultraviolet laserdesorption/ionization‐time‐of‐flight‐mass spectrometry (UV‐LDI‐TOF‐MS) and electrospray ionization‐time‐of‐flight‐mass spectrometry (ESI‐TOF‐MS)] as well as by thin layer chromatography analysis (TLC), electronic spectroscopy (UV‐absorption, fluorescence emission and excitation spectroscopy) and ¹H nuclear magnetic resonance spectroscopy (¹H‐NMR). In general, all compounds, except for CHC and SA, remained unchanged after fusion. CHC showed loss of CO₂, yielding the trans‐/cis‐4‐hydroxyphenylacrilonitrile mixture. This mixture was unambiguously characterized by MS and ¹H‐NMR spectroscopy, and its sublimation capability was demonstrated. These results explain the well‐known cluster formation, fading (vanishing) and further recovering of CHC when used as a matrix in UV‐MALDI‐MS. Commercial SA (SA 98%; trans‐SA/cis‐SA 5 : 1) showed mainly cis‐ to‐trans thermal isomerization and, with very poor yield, loss of CO₂, yielding (3′,5′‐dimethoxy‐4′‐hydroxyphenyl)‐1‐ethene as the decarboxilated product. These thermal conversions would not drastically affect its behavior as a UV‐MALDI matrix as happens in the case of CHC. Complementary studies of the photochemical stability of these matrices in solid state were also conducted. Copyright © 2008 John Wiley & Sons, Ltd.     

Synthesis,characterization, and determination of photophysicochemical properties of peripheral and nonperipheral tetra‐7‐oxy‐3,4‐dimethylcoumarin substituted zinc,indium phthalocyanines

The photochemical and photophysical properties of peripheral and nonperipheral zinc and indium phthalocyanines containing 7‐oxy‐3,4‐dimethylcoumarin synthesized were investigated in this study. 7‐Hydroxy‐3,4‐dimethylcoumarin ( 1 ) was synthesized via Pechmann condensation reaction and then the phthalonitrile derivatives [4‐(7‐oxy‐3,4‐dimethylcoumarino)phthalonitrile ( 2 ) and 3‐(7‐oxy‐3,4‐dimethylcoumarino)phthalonitrile ( 3 )] were synthesized by nucleophilic aromatic substitution. Phthalocyanine compounds containing coumarin units on peripheral ( 4 and 5 ) and nonperipheral ( 6 and 7 ) positions were prepared via cyclotetramerization of phthalonitrile compounds. All compounds' characterizations were performed by spectroscopic methods and elemental analysis. The phthalocyanine derivatives' ( 4–7 ) photochemical and photophysical properties were studied in DMF. The photophysical (fluorescence quantum yields and lifetimes) and photochemical (singlet oxygen and photodegradation quantum yields) properties of these novel phthalocyanines ( 4 – 7 ) were studied in DMF. They produced good singlet oxygen (e.g., Φ_Δ = 0.93 for 7 ) and showed appropriate photodegradation (in the order of 10^?5), which is very important for photodynamic therapy applications.     

Singlet Oxygen Sensor Green®: photochemical behavior in solution and in a mammalian cell

The development of efficient and selective luminescent probes for reactive oxygen species, particularly for singlet molecular oxygen, is currently of great importance. In this study, the photochemical behavior of Singlet Oxygen Sensor Green^® (SOSG), a commercially available fluorescent probe for singlet oxygen, was examined. Despite published claims to the contrary, the data presented herein indicate that SOSG can, in fact, be incorporated into a living mammalian cell. However, for a number of reasons, caution must be exercised when using SOSG. First, it is shown that the immediate product of the reaction between SOSG and singlet oxygen is, itself, an efficient singlet oxygen photosensitizer. Second, SOSG appears to efficiently bind to proteins which, in turn, can influence uptake by a cell as well as behavior in the cell. As such, incorrect use of SOSG can yield misleading data on yields of photosensitized singlet oxygen production, and can also lead to photooxygenation‐dependent adverse effects in the system being investigated.     

Continuous Flow Photochemistry

Due to the narrow width of tubing/reactors used, photochemistry performed in micro‐ and mesoflow systems is significantly more efficient than when performed in batch due to the Beer‐Lambert Law. Owing to the constant removal of product and facility of flow chemical scalability, the degree of degradation observed is generally decreased and the productivity of photochemical processes is increased. In this Personal Account, we describe a wide range of photochemical transformations we have examined using both visible and UV light, covering cyclizations, intermolecular couplings, radical polymerizations, as well as singlet oxygen oxygenations.     

Photoinduced Electron‐Transfer Oxidation of Olefins with Molecular Oxygen Sensitized by Tetrasubstituted Dimethoxybenzenes: A Non‐Singlet‐Oxygen Mechanism

α‐Methylstyrene ( 1 ) was photo‐oxidized in the presence of a series of alkylated dimethoxybenzenes as sensitizers in an oxygen‐saturated MeCN solution to afford the cleaved ketone 2 , epoxide 3 , as well as a small amount of the ene product 4 in ca. 1 : 1 : 0.04 ratio. The relative rate of conversion was well‐correlated with the fluorescence quantum yield of sensitizers. Thus, a non‐singlet‐oxygen mechanism is proposed, in which an excited sensitizer is quenched by (ground‐state) molecular oxygen to produce a sensitizer radical cation and a superoxide ion (O), the former of which oxidizes the substrate, while the latter reacts with the resulting olefin radical cation ( 1 ^{+ .}) to give the major oxidation products. Photodurability of such electron‐donating sensitizers is dramatically improved by substituting four aromatic H‐atoms in 1,4‐dimethoxybenzene with Me or fused alkyl groups, which provides us with an environmentally friendly, clean method of photochemical functionalization with molecular oxygen, alternative to the ene reaction via singlet oxygenation.     

Impact of Dye‐Protein Interaction and Silver Nanoparticles on Rose Bengal Photophysical Behavior and Protein Photocrosslinking

The role of recombinant Type‐I human collagen in the free form or forming AgNP@collagen on the photophysical and photochemical behavior of rose Bengal was analyzed. The formation of dye aggregates on the protein surface was experimentally observed and corroborated by docking calculations. The formation of such aggregates is believed to change the main oxidative mechanism from Type‐II (singlet oxygen) to Type‐I (free radical) photosensitization. Remarkably, the presence of AgNP in the form of AgNP@collagen altered the dynamics of dye triplet deactivation, effectively preventing the dye degradation and reducing the extent of protein crosslinked. Both crosslinked rHC and AgNP@collagen were able to support fibroblasts proliferation, but only the material containing silver was resistant to S. epidermidis infection.     

Photophysical and Photochemical Properties of Naturally Occurring normelinonine F and Melinonine F Alkaloids and Structurally Related N(2)‐ and/or N(9)‐methyl‐β‐carboline Derivatives

In the present work, we have synthesized and fully characterized the photophysical and photochemical properties of a selected group of N‐methyl‐β ‐carboline derivatives (9‐methyl‐β ‐carbolines and iodine salts of 2‐methyl‐ and 2,9‐dimethyl‐β ‐carbolinium) in aqueous solutions, in the pH range 4.0–14.5. Moreover, despite the quite extensive studies reported in the literature regarding the overall photophysical behavior of N‐unsubstituted β Cs, this work constitutes the first full and unambiguous characterization of anionic species of N‐unsubstituted β Cs (nor harmane, harmane and harmine), present in aqueous solution under highly alkaline conditions (pH > 13.0). Acid dissociation constants (K _a), thermal stabilities, room temperature UV –visible absorption and fluorescence emission and excitation spectra, fluorescence quantum yields (Ф _F) and fluorescence lifetimes (τ _F), as well as quantum yields of singlet oxygen production (Ф _Δ) have been measured for all the studied compounds. Furthermore, for the first time to our knowledge, chemometric techniques (MCR ‐ALS and PARAFAC ) were applied on these systems, providing relevant information about the equilibria and species involved. The impact of all the foregoing observations on the biological role, as well as the potential biotechnological applications of these compounds, is discussed.     

One‐Step Borylation of 1,3‐Diaryloxybenzenes Towards Efficient Materials for Organic Light‐Emitting Diodes

The development of a one‐step borylation of 1,3‐diaryloxybenzenes, yielding novel boron‐containing polycyclic aromatic compounds, is reported. The resulting boron‐containing compounds possess high singlet‐triplet excitation energies as a result of localized frontier molecular orbitals induced by boron and oxygen. Using these compounds as a host material, we successfully prepared phosphorescent organic light‐emitting diodes exhibiting high efficiency and adequate lifetimes. Moreover, using the present one‐step borylation, we succeeded in the synthesis of an efficient, thermally activated delayed fluorescence emitter and boron‐fused benzo[6]helicene.     

Cyclobis(7,8‐(para‐quinodimethane)‐4,4′‐triphenylamine) and Its Cationic Species Showing Annulene‐Like Global (Anti)Aromaticity

π‐Conjugated macrocycles containing all‐benzenoid rings usually show local aromaticity, but reported herein is the macrocycle CBQT , containing alternating para‐quinodimethane and triphenylamine units displaying annulene‐like anti‐aromaticity at low temperatures as a result of structural rigidity and participation of the bridging nitrogen atoms in π‐conjugation. It was easily synthesized by intermolecular Friedel–Crafts alkylation followed by oxidative dehydrogenation. X‐ray crystallographic structures of CBQT , as well as those of its dication, trication, and tetracation were obtained. The dication and tetracation exhibited global aromaticity and antiaromaticity, respectively, as confirmed by NMR measurements and theoretical calculations. Both the dication and tetracation possess open‐shell singlet ground states, with a small singlet–triplet gap.     

Measurement of the dissolved oxygen concentration in acrylate monomers with a novel photochemical method

Because of the well‐known radical‐scavenging behavior, molecular oxygen is capable of inhibiting free‐radical chain polymerizations of unsaturated monomers. The deleterious effects of diffused oxygen in a polymerization system result in both a reduced polymerization rate and the loss of surface properties of a polymer film or coating. However, reliable data for oxygen concentration in organic monomers are relatively scarce because of the experimental and instrumental limitations of the commercially available techniques. In this study, a photochemical method was developed and was used to obtain the dissolved oxygen concentration in seven acrylate monomers. The principle of the method was to convert ground‐state molecular oxygen dissolved in monomer to the excited, singlet‐state oxygen and then react the singlet oxygen with a third compound (singlet oxygen trapper). By monitoring the concentration of this singlet oxygen trapper spectrophotometrically, the concentration of dissolved oxygen can be obtained with the established stoichiometry for the reaction between singlet oxygen and trapper. The singlet oxygen concentrations in the acrylate monomers varied from 0.59 to 2.07 × 10^?3 mol/L, depending on the monomer structure. The strategies and considerations for generalizing the method to other systems, including highly oxygenated organics, are discussed. © 2004 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 42: 1285–1292, 2004     

Synthesis and crystallization of star‐shaped photocleavable poly(ε‐caprolactone)s

Here, we report on the synthesis and different crystallization behavior of linear‐ and star‐ PCL's containing a photocleavable linker (5‐hydroxy‐2‐nitro benzaldehyde), modulated by photochemical switching. Basis is the attachment of a photocleavable moiety close to the star‐core of a three‐arm star poly(caprolactone), so that the crystallization behavior can be controlled via a photochemical stimulus. The polymerization of ε‐caprolactone using a trivalent photocleavable initiator and stannous octanoate catalyst resulted in the synthesis of different molecular weights of star‐shaped photocleavable polymers. Various techniques like ¹H NMR and ESI‐TOF‐MS confirmed the successful synthesis of the star‐shaped polymers. Complete photocleavage is ensured via GPC, HPLC, and ESI‐TOF‐MS. DSC studies clearly indicated the enhancement in crystallinity after photocleavage of the star‐shaped poly(ε‐caprolactone)s. Hence, for the first time phototriggered crystallization behavior of PCL polymers is reported, where the confinement exerted by the star architecture is removed by photoirradiation. © 2014 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2015 , 53, 642–649     

A new approach to measuring the action spectrum for singlet oxygen production by human retinal lipofuscin

The human retinal pigment epithelial (RPE) layer contains a complex mixture of components called lipofuscin; this mixture forms with age and with various genetic disorders such as Stargardt's disease. Its presence may contribute to retinal deterioration via several mechanisms including photochemical processes. In the lipofuscin mixture, both type I and II mechanisms have been identified, with the latter consisting of the generation of singlet oxygen. Several components of that mixture have been identified, most notably a bis-retinoid pyridinium compound called A2E and its derivatives. Photo-oxidative studies on the compound A2E have revealed that its dominant photochemical mechanism is via free radical or type I processes. Because singlet oxygen is an important photooxidative intermediate in tissue, its generation in the RPE may contribute to retinal maculopathies. It is therefore necessary to determine which specific component(s) in the lipofuscin mixture produce singlet oxygen upon excitation with light. This was ascertained by evaluating the action spectrum for singlet oxygen production for the whole lipofuscin mixture using time-resolved spectroscopy. Singlet oxygen was generated by excitation of the sample at different wavelengths while maintaining a constant beam energy, and was directly detected by its phosphorescence decay at 1270 nm using a Ge photodiode. The action spectrum for singlet oxygen sensitization by the organic soluble portion of lipofuscin had an absorption maximum at ca 380 nm, which is to the blue of A2E (maximum at 430 nm). Compounds with a similar absorption maximum eluted in the HPLC earlier than A2E and were detected in human lipofuscin. The concentration of this component apparently increased in concentration in human RPE lipofuscin mixture as a function of age up to 90 years old.     

Identification and characterization of stress degradation products of sumatriptan succinate by using LC/Q‐TOF‐ESI‐MS/MS and NMR: Toxicity evaluation of degradation products

Sumatriptan succinate, a selective 5‐HT1B receptor agonist, was subjected to forced degradation studies as per to International Conference on Harmonization‐specified conditions. The drug exclusively showed its degradation under basic, photolytic, and oxidative stress conditions, whereas it was found to be stable under acidic, thermal, and neutral conditions. Eight (DP‐1 to DP‐8) degradation products were identified and characterized by UPLC‐ESI/MS/MS experiments combined with accurate mass measurements. The effective chromatographic separation was achieved on Hibar Purospher STAR, C18 (250 × 4.6 mm, 5 μm) column using mobile phase consisting of 0.1% formic acid and methanol at a flow rate of 0.6 mL/minute in gradient elution method. It is noteworthy that 2 major degradation products DP‐3 and DP‐7 were isolated using preparative HPLC and characterized by advanced NMR experiments. The degradation pathway of the sumatriptan was established, which was duly justified by mechanistic explanation. In vitro cytotoxicity of isolated DPs was tested on normal human cells such as HEK 293 (embryonic kidney cells) and RWPE‐1 (normal prostate epithelial cells). This study revealed that they were nontoxic up to 100 μm concentration. Further, in silico toxicity of the drug and its degradation products was determined using ProTox‐II prediction tool. This study revealed that DP‐4 and DP‐8 are predicted for immune toxicity. Amine oxidase A and prostaglandin G/H synthase 1 are predicted as toxicity targets for DP‐3, DP‐4, and DP‐6 whereas DP‐1 and DP‐2 are predicted for amine oxidase A target.     

Use of quadrupole time of flight mass spectrometry for the characterization of transformation products of the antibiotic sulfamethazine upon photocatalysis with Pd‐doped ceria‐ZnO nanocomposite

The photocatalytic degradation of the antibiotic sulfamethazine under excitation at 365 nm of Pd‐doped ceria‐ZnO nanocomposite, titanium dioxide and iron(III) aqua complex was deeply studied from the analytical point of view. It reveals the formation of nine degradation products that were detected in their protonated forms using LC/electrospray ionization quadrupole time‐of‐flight MS in the positive mode. Their formation involves the hydroxyl radical, and their concentrations increased with irradiation time. Collision‐induced dissociation tandem mass spectrometry associated with the accurate mass measurements was efficiently used for the elucidation of their chemical structures. None of these identified degradation products has been already reported in the literature. Three by‐products result from the hydroxylation at the pyrimidine moiety as well as at the aromatic part, two of them arise from the scission of the pyrimidine group, and finally, three of them come from the scission of the sulfamide bridge. This points the evidence of studying the fate of these degradation products if their toxicity is demonstrated because they are clearly the result of the reaction of hydroxyl radical with the antibiotic sulfamethazine. Copyright © 2015 John Wiley & Sons, Ltd.     

COMPARATIVE STUDY OF OXIDATION OF NUCLEIC ACID COMPONENTS BY HYDROXYL RADICALS, SINGLET OXYGEN AND SUPEROXIDE ANION RADICALS

Abstract— Superoxide radicals, singlet oxygen and hydroxyl radicals are individually or in combination involved in radiation or photochemical processes and in various enzymatic reactions. The reactivity and the mechanism of reaction of these oxygen species with some biologically significant DNA components were investigated through the characterization of the final oxidation products.
Superoxide radicals appear to be unreactive with purine and pyrimidine 2'-deoxyribonucleosides. However, the autoxidation reaction of 6-hydroxydopamine leads to extensive degradation of thymine through the intermediary of hydroxyl radicals. Chemically and microwave-discharge generated singlet oxygen oxidation is specific to 2'-deoxyguanosine. The main oxidized products of these reactions were also characterized as well as an as yet unidentified nucleoside in the methylene-blue photooxydation of 2-deoxyguanosine. These results, in addition to specific deuterium effect experiments, lend support to the involvment of singlet oxygen (type II mechanism) in the methylene-blue photosentization. No singlet oxygen effect was observed in aqueous irradiated system.     

The Triplet State of 6‐thio‐2′‐deoxyguanosine: Intrinsic Properties and Reactivity Toward Molecular Oxygen

Thiopurine prodrugs are currently among the leading treatment options for leukemia, immunosuppression, and arthritis. Patients undergoing long‐term thiopurine treatment are at a higher risk of developing sunlight‐induced skin cancers than the general population. This side effect originates from the cellular metabolization of thiopurine prodrugs to form 6‐thio‐2′‐deoxyguanosine, which can absorb UVA radiation, populating its reactive triplet state and leading to oxidatively generated damage. However, the photo‐oxidation mechanism is not fully understood. In this contribution, the oxidation potential and the adiabatic triplet energy of 6‐thio‐2′‐deoxyguanosine are estimated computationally, whereas the intrinsic rate of triple‐state decay and the rate constant for triplet quenching by molecular oxygen are determined using time‐resolved spectroscopic techniques. A singlet oxygen quantum yield of 0.24 ± 0.02 is measured in aqueous solution (0.29 ± 0.02 in acetonitrile). Its magnitude correlates with the relatively low percentage of triplet‐O₂ collision events that generate singlet oxygen (S_Δ = 37%). This behavior is rationalized as being due to the exergonic driving force for electron transfer between the triplet state of 6‐thio‐2′‐deoxyguanosine and molecular oxygen (ΔG_ET = ?69.7 kJ mol^?1), resulting in the formation of a charge‐transfer complex that favors nonradiative decay to the ground state over triplet energy transfer.     

A Charge‐Stabilizing,Multimodular, Ferrocene–Bis(triphenylamine)–Zinc‐porphyrin–Fullerene Polyad

A novel multimodular donor–acceptor polyad featuring zinc porphyrin, fullerene, ferrocene, and triphenylamine entities was designed, synthesized, and studied as a charge‐stabilizing, photosynthetic‐antenna/reaction‐center mimic. The ferrocene and fullerene entities, covalently linked to the porphyrin ring, were distantly separated to accomplish the charge‐separation/hole‐migration events leading to the creation of a long‐lived charge‐separated state. The geometry and electronic structures of the newly synthesized compound was deduced by B3LYP/3‐21G(*) optimization, while the energy levels for different photochemical events was established using data from the optical absorption and emission, and electrochemical studies. Excitation of the triphenylamine entities revealed singlet‐singlet energy transfer to the appended zinc porphyrin. As predicted from the energy levels, photoinduced electron transfer from both the singlet and triplet excited states of the zinc porphyrin to fullerene followed by subsequent hole migration involving ferrocene was witnessed from the transient absorption studies. The charge‐separated state persisted for about 8.5 μs and was governed by the distance between the final charge‐transfer product, that is, a species involving a ferrocenium cation and a fullerene radical anion, with additional influence from the charge‐stabilizing triphenylamine entities located on the zinc‐porphyrin macrocycle.