Quantum chemical determination of molecular geometries and interpretation of FTIR and Raman spectra for 2,3,4-and 2,3,6-tri-fluoro-benzonitriles

Raman and FTIR spectra for 2,3,4- and 2,3,6-tri-fluoro-benzonitriles have been recorded in the regions 50–4000 cm⁻¹ and 400–4000 cm⁻¹, respectively. Measurement of depolarization ratios for the Raman lines has also been made. Optimized geometrical parameters, charge distributions and vibrational wavenumbers were calculated using ab initio quantum chemical method. Normal coordinate analysis has also been carried out to help assign the fundamentals of these molecules. Each vibration has been assigned using observed wavenumbers in the IR and Raman spectra and their relative intensities, depolarization ratios of the Raman lines, the calculated frequencies, vector displacements and potential energy distributions (PEDs).     

Far infrared spectra, conformational equilibria, vibrational assignments, ab initio calculations and structural parameters for 2-bromoethanol

The far infrared spectrum from 370 to 50 cm⁻¹ of gaseous 2-bromoethanol, BrCH₂CH₂OH, was recorded at a resolution of 0.10 cm⁻¹. The fundamental O–H torsion of the more stable gauche (Gg′) conformer, where the capital G refers to internal rotation around the C–C bond and the lower case g to the internal rotation around the C–O bond, was observed as a series of Q-branch transitions beginning at 340 cm⁻¹. The corresponding O–H torsional modes were observed for two of the other high energy conformers, Tg (285 cm⁻¹) and Tt (234 cm⁻¹). The heavy atom asymmetric torsion (rotation around C–C bond) for the Gg′ conformer has been observed at 140 cm⁻¹. Variable temperature (−63 to −100°C) studies of the infrared spectra (4000–400 cm⁻¹) of the sample dissolved in liquid xenon have been recorded. From these data the enthalpy differences have been determined to be 411±40 cm⁻¹ (4.92±0.48 kJ/mol) for the Gg′/Tt and 315±40 cm⁻¹ (3.76±0.48 kJ/mol) for the Gg′/Tg, with the Gg′ conformer the most stable form. Additionally, the infrared spectrum of the gas, and Raman spectrum of the liquid phase are reported. The structural parameters, conformational stabilities, barriers to internal rotation and fundamental frequencies have been obtained from ab initio calculations utilizing different basis sets at the restricted Hartree–Fock or with full electron correlation by the perturbation method to second order. The theoretical results are compared to the experimental results when appropriate. Combining the ab initio calculations with the microwave rotational constants, r₀ adjusted parameters have been obtained for the three 2-haloethanols (F, Cl and Br) for the Gg′ conformers.     

Vibrational (FT-IR and FT-Raman) and NMR studies on selected metal (Ca, Mn, Zn) complexes with ortho-, meta-, and para-iodobenzoic acids

The vibrational (FT-IR and FT-Raman) and NMR (¹H and ¹³C) spectra of Ca, Mn, and Zn complexes with ortho-, meta-, and para-iodobenzoic acids have been studied. The solid state samples of all complexes have been measured within the range 4000–400 cm⁻¹, while water solutions of ortho-iodobenzoates within the range 4000–800 cm⁻¹. Based on previous experimental data and normal mode calculations for simpler complexes the assignment of bands observed in vibrational spectra of studied compounds has been done. Some significant differences in vibrational structure (frequency and intensity of selected bands) have been observed and discussed. The effect of metal on ring vibrations and carboxylic anion stretching and deformation has been investigated. Also, influence of iodine substitution on the aromatic ring and carboxylic anion, depending on iodine ring position, has been discussed. In case of soluble compounds, wavenumbers of characteristic bands of water solution samples have been compared with wavenumbers of corresponding bands of solid state samples.     

Born–Oppenheimer molecular dynamics of phenol in a water cluster

Born–Oppenheimer molecular dynamics for a phenol molecule in a cluster with 32 water molecules is reported. The results for the dynamics provide new theoretical informations on the role played by phenol as an hydrophobic/hydrophylic probe. Significant differences between the short-time hydrogen bond dynamics related to water–water and phenol–water interactions are observed. The vibrational spectra calculated from the Fourier transform of time correlation functions were compared with experimental data on phenol–water clusters and it was found that the average red-shift of the phenol ν_OH frequency (78 ± 36 cm⁻¹) is less important than what is observed in small phenol–water clusters at low temperatures (133–312 cm⁻¹).     

Conformational studies of cyclopropylmethyl isocyanate from temperature dependent FT-IR spectra of xenon solutions and ab initio calculations

Variable temperature (−55 to −100 °C) studies of the infrared spectra (3200 to 100 cm⁻¹) of cyclopropylmethyl isocyanate, c-C₃H₅CH₂NCO, dissolved in liquefied xenon, have been carried out. The infrared spectra (gas and solid) as well as the Raman spectrum of the liquid have been recorded from 3200 to 100 cm⁻¹. By analyzing six conformer pairs in xenon solutions, an enthalpy difference of 193 ± 19 cm⁻¹ (2.31 ± 0.23 kJ/mol) was obtained with the gauche–cis rotamer (the first designation indicates the orientation of the CNCO group with respect to the three-membered ring, the second designation indicates the relative orientation of the NCO group with respect to the bridging CC bond) the more stable form and the only form present in polycrystalline solid. The abundance of the cis–trans conformer present at ambient temperature is 16 ± 1%. The potential function governing the conformational interchange has been obtained from B3LYP/6-31G(d) calculations and the two-dimensional potential has been obtained. From MP2 ab initio calculations utilizing various basis sets with diffuse functions, the gauche–cis conformer is predicted to be more stable by 223 to 269 cm⁻¹, which is consistent with the experimental results. However, without diffuse functions the predicted conformational energy differences are much smaller (77–166 cm⁻¹). Similar diffuse function dependency affects density functional theory calculations by the B3LYP method to a lesser extent. A complete vibrational assignment for the gauche–cis conformer is proposed and several fundamentals for the cis–trans conformer have been identified. The structural parameters, dipole moments, conformational stability, vibrational frequencies, infrared intensities and Raman activities have been predicted from ab initio calculations and r₀ structural parameters are estimated. These experimental and theoretical results are compared to the corresponding quantities of some similar molecules.     

A study of the Raman spectra of alkanes in the Fermi-resonance region

The experimental and theoretically predicted Raman spectra for the first few alkanes in the homologous series: methane, ethane, propane and butane are presented for the region 2700–3100 cm⁻¹. The structure of the spectra is rather complex. Analysis of the results obtained shows that Fermi resonance occurs between the CH stretching vibrations in the 3000 cm⁻¹ region and the 2ν overtones of deformation vibrations in the low frequency (1450–1500 cm⁻¹) region.     

Infrared and Raman spectra, conformational stability, ab initio calculations of structure, and vibrational assignment of 2-hexyne

The infrared spectra (3500–50 cm⁻¹) of the gas and solid and the Raman spectra (3500–50 cm⁻¹) of the liquid and solid have been recorded for 2-hexyne, CH₃–CC–CH₂CH₂CH₃. Variable temperature studies of the infrared spectrum (3500–400 cm⁻¹) of 2-hexyne dissolved in liquid krypton have also been recorded. Utilizing four anti/gauche conformer pairs, the anti(trans) conformer is found to be the lower energy form with an enthalpy difference of 74±8 cm⁻¹ (0.88±0.10 kJ/mol) determined from krypton solutions over the temperature range −105 to −150 °C. At room temperature it is estimated that there is 42% of the anti conformer present. Equilibrium geometries and energies of the two conformers have been determined by ab initio (HF and MP2) and hybrid DFT (B3LYP) methods using a number of basis sets. Only the HF and DFT methods predict the anti conformer as the more stable form as found experimentally. A vibrational assignment is proposed based on the force constants, relative intensities, depolarization ratios from the ab initio and DFT calculations and on rotational band contours obtained using the calculated equilibrium geometries. From calculated energies it is shown that the CH₃ group exhibits almost completely free rotation which is in agreement with the observation of sub-band structure for the degenerate methyl vibrations from which values of the Coriolis coupling constants, ζ, have been determined. The results are compared to similar properties of some corresponding molecules.     

Analysis of the vibrational spectra of 1-methyluracil and its isotopic derivatives by ab initio calculations

The vibrational spectrum of 1-methyluracil trapped in an argon matrix has been analysed based on ab initio Hartree—Fock SCF calculations with a split-valence 4–21 basis set. The directly computed theoretical harmonic force field was scaled with empirical scale factors which were transferred from uracil (except for the methyl vibrational modes) to provide an a priori prediction of fundamental frequencies and intensities. The average deviations between experiment and prediction were 9.8 cm⁻¹ for the in-plane vibrations and 18.3 cm⁻¹ for the ring out-of-plane modes. After a few corrections of assignment of the observed spectrum, a new set of scale factors was optimized to give the best force field available from combined consideration of the experimental and theoretical information. These scale factors reduced the average deviations to 6.7 cm⁻¹ for the in-plane modes and to 11.7 cm⁻¹ for the out-of-plane ones. The vibrational spectra of seven isotopic derivatives (-2¹⁸0, -4¹⁸0, -3d, -5d, -6d, -5, 6d₂ and -CD₃) of 1-methyluracil were predicted with the force field resulting from the optimized set of scale factors, and compared with the crystal-phase experimental data. A few misassignments in the experimental isotopic spectra have been corrected. Vibrational absorption intensities have been computed and compared with experiment and with an earlier calculation.     

An infrared study of CD3CN in isopropanol, dimethyl formamide, and dimethyl sulfoxide

The vibrational characteristics of deuterated acetonitrile dissolved in isopropanol, dimethyl formamide (DMF), and dimethyl sulfoxide (DMSO) have been studied. Observed vibrational bands show substantial frequency shifts, the amounts of which vary almost linearly with concentration. The absorption feature in the region of 2220–2280 cm⁻¹ was deconvoluted to the consisting absorption bands. The band at 2258 cm⁻¹ of pure CD₃CN, which is on the low frequency side of the monomer CN stretch (ν₂), is attributed to the CN stretch of the dimer (ν′₂). The shoulder found on the further low frequency side of the ν₂ band, particularly in dilute solution, is believed to be due to ν₅, and its frequency and intensity vary largely as a function of concentration along with those of other vibrational bands involved with the CD₃ group. The ν₅ band of pure CD₃CN is believed to be active and located at about 2251 cm⁻¹. Ab initio calculations have also been performed for the solute–solvent complexes, CD₃CN–DMF and CD₃CN–DMSO, at the MP2/6-31+G(2d,p) level assuming anti-parallel configurations. The calculated results show a good agreement with the observed results.     

Spectra and structure of phosphorus-boron compounds : IV. Vibrational spectra of solid trifluorophosphineborane

The Raman spectra of F₃PBH₃ and F₃PBD₃ have been recorded (2500-10 cm⁻¹) of the liquids (−80°C) and solids (−196°C) as well as the infrared spectra (4000-33 cm⁻¹) of the solids. In the spectrum of the solid state many of the ¹⁰B and ¹¹B fundamentals were clearly defined and it was also possible to assign the BH₃ torsional frequency from the infrared and Raman spectra of the solids. A complete vibrational assignment is proposed and a normal coordinate calculation carried out. The force constant of 2.46 mdyn Å⁻¹ for the P-B stretching mode is consistent with the short P-B bond; this constant is compared to the similar quantity for several other phosphorus-boron compounds. All of the E modes for the “free” molecule are shown to be split by the site symmetry which indicates that the molecules occupy C_s or C₁ sites. The large number of observed lattice modes is consistent with two or more molecules per primitive cell. The torsional frequency was observed at 224 cm⁻¹ and 167 cm⁻¹ in hydrogen and deuterium compounds in the solid, respectively. These frequencies gave a periodic barrier of 4.15 kcal mole⁻¹ for F₃PBH₃ and 4.31 kcal mole⁻¹ for F₃PBD₃. CNDO/2 calculations have been carried out for F₃PBH₃ and the isoelectronic F₃SiCH₃ molecule in both the staggered and eclipsed forms and the dipole and barrier origins are discussed.     

Gaseous nitryl azide N4O2: A joint theoretical and experimental study

Gaseous nitryl azide N₄O₂ is generated by the heterogeneous reaction of gaseous ClNO₂ with freshly prepared AgN₃ at −50 °C. The geometric and electronic structure of the molecule in the gas phase has been characterized by in situ photoelectron spectroscopy (PES) and quantum chemical calculations. The experimental first vertical ionization energy of N₄O₂ is 11.39 eV, corresponding to the ionization of an electron on the highest occupied molecular orbital (HOMO) {4a″(π_{nb(N4–N5–N6)})}⁻¹. An apparent vibrational spacing of 1600 ± 60 cm⁻¹ (ν_asO1N2O3) on the second band at 12.52 eV (π_{nb(O1–N2–O3)}) further confirms the preference of energetically stable chain structure in the gas phase. To complement the experimental results, the potential-energy surface of this structurally novel transient molecule is discussed. Both calculations and spectroscopic results suggest that the molecule adopts a trans-planar chain structure, and a five-membered ring decomposition pathway is more favorable.     

Raman and infrared spectra, conformational stability, ab initio calculations and vibrational assignments for 2-chloroethyl silane

The infrared (3500–30 cm⁻¹) spectra of gaseous and solid and the Raman (3500–10 cm⁻¹) spectra of liquid with quantitative depolarization ratios and solid 2-chloroethyl silane, ClCH₂CH₂SiH₃, have been recorded. Similar data have been recorded for the Si–d₃ isotopomer. These data indicate that two conformers, trans and gauche, are present in the fluid states but only one conformer, trans, is present in the solid. The mid-infrared spectra of the sample dissolved in liquified xenon as a function of temperature (−55 to −100°C) has been recorded. The enthalpy difference between the conformers has been determined to be 181±12 cm⁻¹ (2.17±0.14 kJ/mol) with the trans rotamer the more stable form. From the isolated Si–H frequencies from the Si–d₂ isotopomer the r_o Si–H distances of 1.484 and 1.483 Å for the trans and 1.481 for the gauche conformers have been obtained. Ab initio calculations have been carried out with several different basis sets up to MP2/6-311+G** from which structural parameters and conformational stabilities have been determined. With all the basis sets the trans form is predicted to be the more stable conformer which is consistent with the experimental results. These results are compared to the corresponding quantities for the carbon analogue.     

On the vibrational spectra and conformational stability of 1,1-dimethylhydrazine from temperature dependent FT-IR spectra of krypton solutions and ab initio calculations

Variable temperature (−105 to −150 °C) studies of the infrared spectra (3500–400 cm⁻¹) of 1,1-dimethylhydrazine, (CH₃)₂NNH₂, in liquid krypton have been carried out. No convincing spectral evidence could be found for the trans conformer which is expected to be at least 600 cm⁻¹ less stable than the gauche form. The structural parameters, dipole moments, conformational stability, vibrational frequencies, and infrared and Raman intensities have been predicted from MP2/6-31G(d) ab initio calculations. The predicted infrared and Raman spectra are compared to the experimental ones. The adjusted r₀ parameters from MP2/6-311+G(d,p) calculations are compared to those reported from an electron diffraction study. The energy differences between the gauche and trans conformers have been obtained from MP2 ab initio calculations as well as from density functional theory by the B3LYP method calculations from a variety of basis sets. All of these calculations indicate an energy difference of 650–900 cm⁻¹ with the B3LYP calculations predicted the larger values. The potential function governing the conformational interchange has been predicting from both types of calculations and comparisons have been made. The barrier to internal rotation by the independent rotor model of the inner methyl group is predicted to have a value of 1812 cm⁻¹ and that of the outer one of 1662 cm⁻¹ from ab initio MP2/6-31G(d) calculations. These values agree well with the experimentally determined values of 1852±16 and 1558±12 cm⁻¹, respectively, from a fit of the torsional transitions with the coupled rotor model. For the coupled rotor model the predicted V′₃₃ (sin 3τ₀ sin 3τ₁ term) value which ranged from 190 to 232 cm⁻¹ is in reasonable agreement with the experimental value of 268±3 cm⁻¹ but the predicted V₃₃ (cos 3τ₀ cos 3τ₁ term) value of −73 to −139 cm⁻¹ is 25% smaller and of the opposite sign of the experimental value of 333±22 cm⁻¹. These theoretical and spectroscopy results are compared to similar quantities of some corresponding molecules.     

Observation and rovibrational analysis of the ν2 band of HCN–HCl

The high-resolution infrared absorption spectrum of an equilibrium mixture of HCN and HCl in a static gas long-path absorption cell is recorded in the 2500–2900 cm⁻¹ spectral region at 205 K. The spectrum shows rovibrational structure which has the typical appearance of a parallel band of a linear molecule and is assigned to the intramolecular H–Cl stretching vibration band ν₂ of the linear HCN–H³⁵Cl heterodimer. The rovibrational analysis of the band yield a band origin ν₀ of 2779.0968(12) cm⁻¹ together with a value for the upper-state rotational constant B′ of 0.067722(2) cm⁻¹. The observed red shift of 107 cm⁻¹ for the ν₂ band of HCN–H³⁵Cl relative to the H–Cl stretching vibration band of monomer H³⁵Cl is in excellent agreement with results from the MP2/6−311++G** level of theory. The value of the upper-state rotational constant shows that the intermolecular hydrogen bond shortens by 0.022 Å upon intramolecular vibrational excitation of the ν₂ mode.     

Infrared, and Raman spectra, conformational stability, normal coordinate analysis, ab initio calculations, and vibrational assignment of 1-chlorosilacyclobutane

The infrared spectra (3500–40 cm⁻¹) of gaseous and solid and the Raman spectra (3500–30 cm⁻¹) of liquid and solid 1-chlorosilacyclobutane, c-C₃H₆SiClH, have been obtained. Both the axial and equatorial conformers with respect to the chlorine atom have been identified in the fluid phases. Variable temperature (−105 to −150°C) studies of the infrared spectra of the sample dissolved in liquid krypton have been carried out. From these data, the enthalpy difference has been determined to be 211±17 cm⁻¹ (2.53±0.21 kJ/mol), with the equatorial conformer being the more stable form and the only conformer remaining in the annealed solid. At ambient temperatures, approximately 26% of the axial conformers are present in the vapor phase. A complete vibrational assignment is proposed for the equatorial conformer, and many of the fundamentals of the axial conformers have also been identified. The vibrational assignments are supported by normal coordinate calculations utilizing ab initio force constants. Complete equilibrium geometries, conformational stabilities, harmonic force fields, infrared intensities, Raman activities, and depolarization ratios have been determined for both rotamers by ab initio calculations employing the 6-31G(d) basis set at the levels of restricted Hartree–Fock (RHF) and/or Moller–Plesset (MP) to second order. Structural parameters have also been obtained using MP2/6-311+G(d,p) ab initio calculations. The r₀ parameters for both conformers are obtained from a combination of the ab initio predicted values and the twelve previously reported microwave rotational constants. The results are discussed and compared to those obtained for some similar molecules.     

Infrared depletion spectroscopy of the doubly hydrogen-bonded aniline–(tetrahydrofuran)2 complex produced in supersonic jet

The vibrational frequencies of the N–H stretching modes of aniline after forming a strong doubly H-bonded complex with tetrahydrofuran (THF) are measured with infrared depletion spectroscopy that uses cluster-size-selective resonance-enhanced multiphoton ionization (REMPI) time-of-flight mass spectrometry. Two strong infrared absorption features observed at 3355 and 3488 cm⁻¹ are assigned to the symmetric and antisymmetric N–H stretching vibrations of the 1:2 aniline–THF complex, respectively. The red-shifts of the N–H stretching vibrations of aniline agree with the ab initio calculated (MP2/6-31G**) aniline-(THF)₂ structure in which both aniline N–H bonds interact with the oxygen atom of THF through two hydrogen bonds. The calculated binding energy is found to be 29.6 kJ mol⁻¹ after corrections for basis set superposition error (BSSE) and zero-point energy. The calculated structure revealed that the angle between the N–H bonds in the NH₂ group increased to 112.5° in the aniline–(THF)₂ complex from that of 109.8° in the aniline. The electronic 0–0 band origin for the S₁ ← S₀ transition is observed at 32,900 cm⁻¹ in the aniline–(THF)₂ complex, giving a red-shift of 1129 cm⁻¹ from that of the aniline molecule.     

Conformational stability of 1-bromo-2-fluoroethane from temperature dependent FT-IR spectra of rare gas solutions

Variable temperature (−55 to −135°C) studies of the infrared spectra (3500–400 cm⁻¹) of 1-bromo-2-fluoroethane, BrCH₂CH₂F, dissolved in liquid krypton and xenon have been recorded. From these data, the enthalpy difference has been determined to be 108±9 cm⁻¹ (1.296±0.113 kJ/mol) and 112±8 cm⁻¹ (1.346±0.098 kJ/mol) from the krypton and xenon solutions, respectively, with the trans conformer the more stable rotamer. Complete vibrational assignments are presented for both conformers which are consistent with the predicted frequencies obtained from the ab initio MP2/6-31G^* calculations. The optimized geometries, conformational stabilities, harmonic force fields, infrared intensities, Raman activities, and depolarization ratios have been obtained from RHF/6-31G^* and/or MP2/6-31G^* ab initio calculations. These quantities are compared to the corresponding experimental quantities when appropriate. Structural parameters and conformational stability have also been obtained from MP2/6-311+G^** calculations. Combining the ab initio predicted structural parameters with the microwave rotational constants, r_o parameters have been obtained for the gauche conformer.     

Infrared and Raman spectra of 5-amino-1,3,4-thiadiazole-2-sulfonamide (Hats). Experimental data and quantum chemistry calculations

The infrared and Raman spectra in the range 4000–50 cm⁻¹ were obtained for 5-amino-1,3,4-thiadiazole-2-sulfonamide. The molecular geometry was optimized by means of the DFT methods of quantum chemistry (B3LYP/6-31G^**), resulting in a structure which agrees quite well with that obtained by X-ray diffraction. The wavenumbers corresponding to the normal modes of vibration were calculated using the same approximation and the associated force field converted to a set of local symmetry coordinates, with subsequent calculation of the potential energy distribution. An assignment of the observed bands is proposed on the basis of such calculations and the comparison with related molecules.     

A theoretical investigation of C5

Large-scale CEPA-1 calculations have been carried out for linear C₅, a molecule of substantial interest to combustion processes and astrochemistry. The equilibrium bond lengths are predicted to be 1.289 Å (outer CC bond) and 1.283 Å (inner CC bond), with an accuracy of 0.002 Å. The calculated ν₃ band origins of 2161 cm⁻¹ (105 CGTO basis) and 2137 cm⁻¹ (150 CGTO basis) are in good agreement with the experimental value of 2169 cm⁻¹. This band has an extremely large transition moment of 0.74 D. The less intense stretching fundamental ν₄ (μ=0.18 D) is predicted to occur at 1478 ± 10 cm⁻¹. Predictions for the totally symmetric stretching and the bending vibrational frequencies (in cm⁻¹) are 2008 (1σ_g⁺), 792 (2σ_g⁺), 570 (1π_u), 209 (1π_g) and 119 (2π_u).     

DFT study and vibrational spectra of the phoshorus-containing G0 generation dendrimer

The Raman (10–3500 cm⁻¹) and infrared (150–3500 cm⁻¹) spectra have been recorded for tris(4-oxibenzaldehyde)thiophosphate. This compound includes structural parts of elementoorganic dendrimers: a core and terminal aldehyde groups. The structural optimization and normal mode analysis are performed for elementoorganic dendrimer on the basis of the ab initio density functional theory. It is found that the dendrimer exist in a single stable conformation with planar C₆H₄CHO fragments. Our calculations show that conformer with one trans and two gauche 4-oxibenzaldehyde groups is realized. All these observations suggest that steric congestion does not disturb the construction of dendrimers even for the highest generations, and that terminal groups are readily available for further reactions. Relying on DFT calculations a complete vibrational assignment is proposed for different parts of the studied dendrimers.