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1.
A comparative study of the decay kinetics of photogenerated transients from small (60 kDalton) and native (124 kDalton) oat phytochrome in the red-absorbing form (Pr) in phosphate buffer containing 5 mM ethylenediamine tetraacetic acid, pH 7.8, (PB) and in PB containing 20% ethylene glycol, has been carried out in the temperature range 275–298 K. The analysis confirmed that at least two primary photoproducts, intermediates Ii700s and Ii7oo are formed from Pr. The kinetic parameters, as observed in PB at 695 nm and 275 K, are similar for the I700 intermediates of both small and native phytochrome. Namely, the lifetimes are about 21 μs (component percentages 38%) for the I Ii700s and about 200 μ.s (62%) for the Ii700S- Arrhenius preexponential factors (A) of about 1016 and 1015 s-1and activation energies of about 61 and 56 kJ/mol were measured for the absorbance decays of the I700S of small and native phytochrome, respectively. The kinetic data favour parallel paths for the formation of the Ii700s from Pr, and the activation parameters indicate that the primary photoreactions of the transformation from Pr to the far-red-absorbing form are restricted to the chromophore within the protein. Moreover, the relatively modest temperature dependence of the lifetimes of the Ii700S from small and native Pr supports the working hypothesis that the ground state reactions to the Iibl, intermediates–although somewhat influenced by the polypeptide fragment that is removed upon degradation of native to small Pr–are localized to the chromophore, as is most probably the case also for the primary photoreactions. The effect of the addition of 20% ethylene glycol on the pre-exponential factors of the time-dependent decay functions is discussed in similar terms of the early stages of the phototransformation.  相似文献   

2.
Abstract— Phototransformation from the red-absorbing form of phytochrome (Pr) to the far-red-absorbing form occurs via at least two reaction stages. We report here on the photoactivity of the intermediates present during these two stages, as detected with 114/118-kdalton Avena phytochrome by a transient spectrum analyzer with two actinic lasers of microsecond duration. Flash activation of intermediates present during the first stage results in their photoconversion back to Pr within the time resolution provided by the analyzer, which is 10 μs. Since these intermediates are present within 60 ns of excitation of Pr (Cordonnier et al. , 1981), a single flash of ms duration as used here should yield a photostationary equilibrium between them and Pr. The proportion of Pr converted to intermediates by a single saturating flash is estimated to be about 30%. Flash activation of intermediates present during the second stage converts them to another transient intermediate stage, which decays thermally to Pr within 2 ms.  相似文献   

3.
Phototransformation of the red-absorbing form of phytochrome (Pr) to the far-red-absorbing form (Pfr) was followed with a custom-built transient spectrum analyzer. Large phytochrome, which consisted of approximately 120000-dalton monomers, was immunopurified or conventionally purified from etiolated oat (Avena sativa L., cv. Garry) shoots. Phototransformation was initiated by exciting Pr with a 115-mJ, 600-ns half-width, 655-nm laser pulse. Absorption spectra were recorded on a microsecond time scale at predetermined times after the flash. It has been reported earlier that flash excitation of large oat Pr produces a transformation intermediate with maximum absorbance near 700 nm in a difference spectrum and that this intermediate decays by two kinetically distinct reactions. Difference spectra for these two reactions are indistinguishable. Both show bleaching centered at 690 nm with no detectable associated absorbance increase between 570 and 830 nm. Subsequent appearance of absorbance at 724 nm, which presumably but not necessarily represents the appearance of Pfr, had earlier been shown to occur by two kinetically distinct reactions for large oat phytochrome. Data presented here indicate in addition the occurrence of a third, slower reaction. Difference spectra for the two faster reactions are indistinguishable, both with maxima near 728 nm and minima near 650 nm. The difference spectrum for the slowest component, however, was qualitatively different exhibiting a maximum near 722 nm with no corresponding minimum. About 15-20% of the absorbance increase at 724 nm occurred by this slowest reaction, which exhibited a half-life of 3 s at 25°C and a Q10 of 1.2 for immunopurified and 1.5 for conventionally purified phytochrome. The percentage occurring by this reaction was independent of temperature over the range studied (1-25dEC). For immunopurified phytochrome the enthalpy of activation, Gibbs free energy of activation, and entropy of activation of this slowest reaction were found to be about lOkJ-mol-1, 75kJ.mol-1, and -220 J.mol-1 K-1, respectively, and for conventionally purified phytochrome 25kJ.mol-1, 75kJ.mol-1and —170 J.mol-1 K-1, respectively. The thermodynamic characteristics of this reaction indicate that it may involve a significant ordering of the protein moiety as it transforms to Pfr.  相似文献   

4.
Abstract— Spores of Dryopteris paleacea and D. filix-mas are positively photoblastic with an optimum in the action spectrum around 665 nm. Light is perceived by phytochrome and the relationship between germination and mole fraction of the far-red-absorbing form of this pigment, Pfr, was investigated with saturating irradiations between 662 and 747 nm under low-fluence-rate conditions. These control irradiations establish a proportion of the total phytochrome, P,tot, as Pfr with Pfr/Ptot–φ at equilibrium. These φ -values were calculated according to data for native oat phytochrome (Kelly and Lagarias, 1985, Biochemistry 24, 6003) and the spectral characteristics of the interference filters. With this method a linear relationship could be found between φ and germination from 2 to 70% for D. paleacea and from 2 to 90% for D. filix-mas, if probit germination was plotted vs probit φ This correlation formed the basis of investigating the phytochrome photoconversion by dye-laser pulses of 380 ± 30 ns under high-fluence-rate conditions, and thus to test quantitatively the impact of the photoreversibility of intermediate reactions of the photoconversion and the red-absorbing form of phytochrome, Pfr on the final Pfr-level. Spore germination was initiated by a single-laser pulse in the range from 592 to 700 nm. The most effective wavelengths were 649 and 660 nm in both species, and at saturation maximal germination (ca. 50%) was obtained from 592 to 665 nm for D. paleacea or ca. 60% germination from 592 to 670 nm for D. filix-mas. Both saturation levels correspond to a ø-value between 0.40 and 0.45. This significantly diminished photoconversion is a consequence of the high-fluence-rate conditions during the laser pulse which establishes the photochromic system between Pr and a set of very early intermediates, Ii700, (= Pr? Ii700). This system can be described by the extinction coefficients of Pr and the intermediates Ii700, and by the quantum yields, 4,φ for the forward and reverse reactions as φ If φ is calculated, assuming a quantum yield of 1:1 for both reactions and with the extinction coefficients of Pr and Ii7(l() (= lumi-R) given by Eilfeld and Riidiger (1985, Z. Naturforsch. 40c , 109), significantly higher values are calculated for / as compared to φ found in the control experiments. These results can be explained either: (i) with a quantum yield ratio φpr-φ1700: φ1700φpr=1:1 and an assumed additional dark reaction leading from Ii700 or later intermediates back to Pr: or (ii) with a quantum yield ratio φpr φ 1700: φ1700 φpr=1:2. In this case all Ii700 have to relax to Pfr. In this case all Ii700 have to relax to Pfr.  相似文献   

5.
The mechanism of I700 decay, representing an early event in the phytochrome Pr→ Pfr phototransformation, was reanalyzed in the microsecond range by conventional laser flash photolysis as well as by two-laser/two-color flash photolysis. Three kinetic models that might describe the I700 decay mechanism following Pr excitation were considered: a parallel, a sequential, and an equilibrium model. These models were used to mathematically simulate both the one- and two-laser flash experiments in an effort to select the model best describing the I700 decay. The sequential model could be excluded already on the basis of the one-laser flash photolysis results alone. Discussion of the two-laser/two-color flash rcsults in the context of the equilibrium and the parallel models is presented.  相似文献   

6.
Abstract— A comparative study of the picosecond kinetics of rye ( Secale cereale L.) phytochrome, its 39 and 23 kDa chromopeptides and deuterated rye phytochrome has been carried out. Evidence is presented that the fluorescence decay of Pr contains a very short lifetime component (14 ps) which has escaped detection in the fluorescence studies reported so far. Thus, the overall decay is well described by four exponential components, two rapid (14 and 44 ps) and two slower ones (157 and 690 ps). The fluorescence decays of deuterated Pr and of a 39 and 23 kDa chromopeptide of Pr also require the analysis in terms of four exponentials for a good fit. Some of the lifetime and amplitude values obtained differ significantly from the values estimated for Pr. In the chromopeptides, the two longer components have distinctly slower decays. For the two faster components the lifetimes remain approximately the same, but their relative amplitudes vary greatly. In deuterated Pr, the lifetimes are affected only slightly by deuteration. In contrast, the decay amplitudes are strikingly altered. Moreover, from a rate equation simulation modelling the observed fluorescence kinetics, it turns out that the yields for the various deactivation steps in the chromopeptides and in deuterated Pr reveal differences from the corresponding values in Pr. The implications of the results presented with respect to the influence of the protein moiety of Pr on the picosecond relaxation process are discussed.  相似文献   

7.
A custom-built modulated split-beam spectrophotometer has been used to measure the absorbance of tissue samples and purified phytochrome whilst exposing the sample to actinic 633 nm laser radiation at fluence rates approaching those of daylight. This approach has allowed the direct observation of the accumulation of phytochrome photoconversion intermediates at high fluence rates. At ca 1250 μmol m?2 s?1 upwards of 35% of the total phytochrome was present in the form of photoconversion intermediates in tissues of maize, sunflower and tomato. In other tissues tested (wheat, bean and Amaranthus) and in purified oat phytochrome, rather smaller levels of intermediates accumulated. Upon “lights-off” only a proportion of the accumulated intermediates decayed to far-red absorbing phytochrome (Pfr), the remainder appearing as the red-absorbing form (Pr). Difference spectra suggested that, at high light levels, Pr may be reformed via a photochemical back-conversion of an intermediate in the Pr—Pfr pathway, although the involvement of intermediates in the Pfr—Pr pathway cannot be excluded. The implications of the results for the ecological function of phytochrome are discussed.  相似文献   

8.
Abstract— The kinetics of the far-red absorbing form of phytochrome (Pfr) appearance from intermediates in the pathway from the red absorbing form of phytochrome (Pr) to Pfr that accumulate under high fluence rate white light have been investigated in 3-day old dark grown Amaranthus caudatus seedlings. The appearance of P(r after a 5 s white light pulse was measured over the temperature range -8 to 25°C in samples flushed with O2 or N2. Over the whole temperature range under anaerobic conditions the kinetics of the slowest component of Pfr appearance are faster than in the presence of O2. Arrhenius plots are linear over this temperature range and indicate the activation energy for the slowest component of Pfr appearance is 44.05 ± 1.97 kJ mol?1 for O2 and 53.69 ± 4.86 kJ mol?1 for N2.  相似文献   

9.
Abstract Comparative fluorescence and photochemical studies of phytochrome in etiolated seedlings of maize and in soluble and membrane-containing fractions isolated from them were camed out. The membrane fractions prepared in the absence of Mg2+ from etiolated coleoptiles contained 13% of total photoreversible phytochrome, which was readily solubilized by mild detergents. Its molecular size was indistinguishable from soluble phytochrome and equal to nondegraded maize phytochrome. Low-temperature fluorescence studies with intact tissue found that the position of the emission maximum at 85 K (λmax) and the extent of the phototransformation of the red-absorbing form (Pr) into the first stable photoproduct, lumi-R, at 85 K (γ1), varied in different parts of etiolated seedlings: λmax and γ1 reached their maximum values in the tips of coleoptiles and roots, 686 nm and 0.30–0.40, whereas the lowest values, 682 nm and ca 0.05, were observed in the root base. These parameters correlated well with those obtained for the pigment in the soluble and membrane-containing fractions: 684 and 680 nm, and 0.33 and 0.06, respectively. The extent of the Pr phototransformation into the far red-absorbing form (Pfr) (γ2) did not differ much: values of 0.80–0.85 and 0.70–0.75 correlated with the high and low values of γ1. These variations of the parameters were interpreted in agreement with our previous observations in terms of two phytochrome A species whose relative concentrations vary depending on the experimental conditions—the longer wavelength bulk light-labile species with high γ1 (Pr″), and the shorter wavelength minor light-stable species with low γ1 (Pr″). Close similarity between Pr’and the soluble phytochrome and between Pr″ and the membrane-bound phytochrome points to the possible origin of the native Pr’and PrPrime; species, thus providing evidence for the existence of membrane-bound pigment in the cell.  相似文献   

10.
Abstract— Photoconversion of the red-light-absorbing form of phytochrome, Pr, to the far-red-light-absorbing form, Pfr, was investigated in vivo at 22°C with 600 or 800 ns laser pulses of high spectral purity and induction of spore germination in Dryopteris paleacea was used as indicator for the progress of photoconversion. This reaction is initiated by a saturating R-laser pulse of 648.5 nm, establishing an equilibrium of the photochromic system between Pr and the very early intermediates, Ii700 (Prφ Ii700)- The decay of Ii700 as well as the formation of Pfr was recorded by the application of a second pulse varied between 698 and 717.5 nm, which inhibits the formation of Plr being absorbed predominantly by Ii700or Pfr, respectively. The most effective inhibition for the second pulse is found up to 10 u.s after the first pulse and this is interpreted by photoreversion of Ii700 to Pr; thus reducing the formation of Pfr from Ii700. This early inhibition decreases between 10 μs to 100 ms after the R-laser pulse, as a result of the decay of Iibl to a bleached species I,;. This decay can be described by three first order kinetics with the rate constants k12= 16830 ± 2970 s-1, k12= 666 ± 218 s-1,k13= 9.8 ± 0.9 s-1. A second inhibition, due to the formation of Pfr, is found for dark intervals <100 ms and can be described by two first order kinetics with the rate constants k21= 2.9 ± 0.6 s-1 and k22= 0.17 s-l.  相似文献   

11.
The population decay of light-induced small polarons in iron-doped lithium niobate is simulated by a Monte-Carlo method on the basis of Holstein's theory. The model considers random walks of both bound polarons (NbLi4+) and free polarons (NbNb4+) ending to deep traps (FeLi3+). The thermokinetic interplay between polaron species is introduced by trapping and de-trapping rates at niobium antisites (NbLi). The decay of the NbLi4+ population proceeds by three possible channels: direct trapping at FeLi3+ sites, hopping on niobium antisites and hopping on Nb regular sites after conversion to the free state. Up to three regimes, each one reflecting the predominance of one of these processes, appear with different activation energies in the Arrhenius plots of the decay time. The influence of FeLi and NbLi concentrations on the transition temperatures is evidenced. For both polaron species, the length of the final hop (trapping length) is found much larger than the usual hopping length and decreases at rising temperature. This trap size effect is a natural consequence of Holstein's theory and may explain some unclear features of polaron-related light-induced phenomena, such as the temperature-dependent stretching exponent of light-induced absorption decays and the anomalous increase of the photoconductivity at high doping levels.  相似文献   

12.
Abstract— The pelletability of Pr from maize coleoptiles was studied as a function of the delay time between a red and a far-red light pulse given in vivo. The obtained curve can be resolved into three parts. The two slowest reactions have half lives of 40 s and 3.6 min at 0°C. Furthermore, a break in the Arrhenius plot from the slowest reaction of the curve indicates that either the phytochrome “receptor” or the phytochrome molecule itself undergoes a jump in the Arrhenius activation energy at 20°C. These data are in good agreement with kinetic studies of phytochrome pelletability also discussed in this paper.  相似文献   

13.
Abstract. The phosphorescence of poly rA at 77 K in an aqueous medium containing glucose is half-quenched by bound ethidium bromide at a fractional concentration, r1/2, of 0.005, and by bound proflavine at r1/2= 0.002: r1/2= 0.024 for Co2+ and r1/2= 0.039 for Mn2+. The decay of the dye-quenched poly rA phosphorescence is markedly nonexponential and decays more rapidly with increasing dye concentration, while the decay of the metal-ion quenched poly rA phosphorescence parallels that of the unquenched poly rA, independent of metal-ion concentration. Förster overlap integrals and critical distances for transfer of both poly rA singlet and triplet excitation to dye singlet states are calculated, and used to explain a consistent interpretation of the experimental results in terms of one-step direct excitation transfer from base to dye or metal ion in a highly folded polymer conformation.  相似文献   

14.
Excess quantities calculated from literature values of experimental density and viscosity in 1,2-dimethoxyethane + water binary systems (from 303.15 to 323.15 K) can lead us to test different correlation equations as well as their corresponding derivative properties. Inspection of the Arrhenius activation energy (Ea) and the enthalpy of activation of viscous flow (ΔH*) shows very close values; here, we can define partial molar activation energies Ea1 and Ea2 for 1,2-dimethoxyethane and water, respectively, along with their individual contribution separately. Correlation between the two Arrhenius parameters of viscosity in all compositions shows existence of main distinct interaction behaviours delimited by particular mole fractions in 1,2-dimethoxyethane. Moreover, we add that correlation between Arrhenius parameters reveals interesting Arrhenius temperature which is closely related to the vapourisation temperature in the liquid vapour equilibrium, and the limiting corresponding partial molar properties can permit us to estimate the boiling points of the pure components.  相似文献   

15.
Flavin‐based catalysts are photoactive in the visible range which makes them useful in biology and chemistry. Herein, we present electrospray‐ionization mass‐spectrometry detection of short‐lived intermediates in photooxidation of toluene catalysed by flavinium ions (Fl+). Previous studies have shown that photoexcited flavins react with aromates by proton‐coupled electron transfer (PCET) on the microsecond time scale. For Fl+, PCET leads to FlH.+ with the H‐atom bound to the N5 position. We show that the reaction continues by coupling between FlH.+ and hydroperoxy or benzylperoxy radicals at the C4a position of FlH.+. These results demonstrate that the N5‐blocking effect reported for alkylated flavins is also active after PCET in these photocatalytic reactions. Structures of all intermediates were fully characterised by isotopic labelling and by photodissociation spectroscopy. These tools provide a new way to study reaction intermediates in the sub‐second time range.  相似文献   

16.
Abstract— To probe the nature of primary photoprocess and the mechanism of the phototransformation of undegraded 124 kDa oat phytochrome, solvent deuterium isotope effects on the fluorescence and phototransformation of phytochrome have been investigated. The fluorescence intensity and lifetime of phytochrome (Pr form) are greater in D20-buffer than in H2O-buffer, suggesting a possible involvement of proton transfer in the primary photoprocess of phytochrome. Although the photostationary equilibrium (Pr to Pfr ratio) was not altered by deuterium oxide, in contrast to degraded phytochrome, the rate constants of both transformations, Pr→ Pfr and Pfr→ Pr were enhanced by up to 24%. The Pr to Pfr phototransformation of degraded phytochrome, however, was retarded by about the same percentage in D2O. These opposite effects of D2O with degraded and undegraded phytochromes underscore the fact that the Pr form from the former reverts to the Pr form in the dark, apparently catalyzed by deuterated general and/or conjugate acidic group(s). With the degraded phytochrome the deuterium oxide enhancement of the rate of dark reversion was approximately 2-fold (Sarkar and Song, 1981). Both the fluorescence intensity and the rates of phototransformation of phytochrome were enhanced in D2O with successive photocyclings (Pr→ Pfr→ Pr→ Pfr→ Pr etc.) with alternating red and far-red irradiation. It has been proposed that successive photocycling of phytochrome in D2O results in proton-deuteron exchange in the partially exposed Ptr chromophore and/or its surrounding amino acid residues.  相似文献   

17.
Abstract— Irradiation of small phytochrome from oat in its Pr form with 15 ns laser pulses of different wavelengths(605–655 nm) gave rise to a difference absorption with maxima at 400 and 685 nm for the first detectable transient. Bleaching of a 660 nm band was observed, non-recuperable up to 1 ms. The transient absorption has a lifetime of 70±15 μs at 273 K. The transient is tentatively identified as lumi-R and the conformation of its chromophore is postulated to be more extended than that of Pr. A deviation from the exponential decay of the lumi-R absorption at 284 and 300 K and the lack of observable enhancement of the far-red absorption within 1 ms are interpreted in terms of the appearance of still other intermediates on this time scale between lumi-R and Pfr phytochrome.  相似文献   

18.
The accumulation of phytochrome in the dark was measured for Avena sativa seedlings after a white light pretreatment and for Sorghum vulgare seedlings after continuous red or far-red light treatments, using the herbicide Norflurazon to prevent greening under continuous irradiation. In both cases the accumulation of phytochrome depends on the state of the phytochrome at the light-dark transition: high Pfr levels (red light pulse) led to a slower rate of phytochrome accumulation than lower Pfr levels (long wavelength far-red (RG 9) light pulse). Poly-(A+)-RNA was isolated fromA. sativa seedlings grown for 48 h in darkness + 24 h WL + light pulse (5 min) (red, RG 9 light, red followed by RG 9 light or RG 9 followed by red light pulse) + 19 h darkness. The poly-(A+)-RNA was translated in a rabbit reticulocyte lysate system and the translation products were immunoprecipitated by specific anti-phytochrome antibodies. It was demonstrated that the activity of mRNA coding for phytochrome was under phytochrome control.  相似文献   

19.
Reaction of perrhenate with the aquated electron in neutral aqueous solution yields ReO42? (kf 1.3 × 1010 M?1 s?1), with an absorption maximum at 290 nm (ε 1700). This decays by a second-order path (kd 1.5 × 109 M?1 s?1) at a rate ~ 100-fold faster than the decay of TcO42? under similar conditions.  相似文献   

20.
The primary quantum yield, Φ1700, for the photoconver-sion of the red-absorbing form of phytochrome, Pr, to the set of primary intermediates, Ii700, was redetermined by laser-induced optoacoustic spectroscopy at very low excitation laser fluences. The Ii700 value obtained is in the range of ΦPfr reported for the complete phototransformation Pr→ Pfr (J. M. Kelly and C. Lagarias, 1985, Biochemistry 24 , 4003–6010). An energy level of ca 150 kJ/ mol was found for the intermediates Ii700, i.e. ca 85% of the 0–0 level of Pr. Furthermore, a molecular expansion of 7 mL/mol (equivalent to 11 Å3/molecule) was determined for the Pr→ Ii700 transformation. It reflects the protein reorganization induced by the geometrical pho-toisomerization of the chromophore, which results in changes of bonding interactions, in particular between the chromophore and its protein surrounding.  相似文献   

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