Fast atom bombardment and secondary ion mass spectra of thiamine hydrochloride

The ratio of the fragment ions at m/z 122 and m/z 123 in the positive ion fast atom bombardment or secondary ion mass spectra of thiamine hydrochloride varies with sample preparation and experimental conditions. For all mass spectra that contained significant abundances of matrix (S) ions [S + H]⁺, the fragment at m/z 123 is the more abundant of the two ions. If [S + H]⁺ ions are not observed in the mass spectrum under the conditions selected, the ion at m/z 122 is more abundant. This correlation suggests that hydrogen transfer to the fragment ion occurs in the gas phase, with the composition of the ion-solvent cluster ions in the selvedge region being the key factor. The ratio of the fragment ions at m/z 123 and m/z 122 is thus an indicator of the extent of protonation in the selvedge, the region immediately above the solvent surface created by primary particle bombardment.     

Fast atom bombardment mass spectrometric study of some unsaturated aryl C-glycosides

Fast atom bombardment (FAB), FAB mass-analysed ion kinetic energy (FAB MIKE) and collision-activated dissociation (FAB CAD-MIKE) mass spectra were obtained for two series of unsaturated anomeric aryl C-glycosides. These tandem mass spectrometric techniques allowed the differentiation of the anomers by analysing either the [M + H]⁺ ion or the [M + met]⁺ ion (met=Li, Na).     

Structural and substituent effects on [M]+. vs. [MH]+ formation in fast atom bombardment mass spectra of simple organic compounds

The peak intensity ratios of [M]^+. vs. [MH]⁺ were measured in the fast atom bombardment (FAB) mass spectra of readily available test compounds with 3-nitrobenzyl alcohol as the matrix. For simple aromatic amines, the ratio increases as the ionization energy of the substrate decreases. 4-Substituted benzophenones showed preferential formation of [MH]⁺ ions, regardless of the nature of the substituents. This is probably due to the fact that the benzophenoes have carbonyl groups which can form hydrogen bonds with the matrix molecule. The peak intensity ratio is roughly proportional to the Hammett σ^+. Among 4-substituted biphenyls, both bromo and chloro substituents afforded abnormally high peak intensity ratios. The effects of the substituents in these compounds are discussed semi-quantitatively in terms of the Hammett correlation and the hard and soft acids and bases principle. The mechanism of ion formation in FAB and chemical ionization (CI) ion sources appeared to be different because some of the compounds studied showed an intense [M]^+. peak with a relatively weak [MH]⁺ peak in FAB spectra but exhibited a strong [MH]⁺ peak in ordinary CI spectra.     

Use of fast atom bombardment mass spectrometry for the characterization of nitroaromatic isomers

Positive and negative ion fast atom bombardment (FAB) mass spectra of some monosubstituted nitroaromatic isomers are reported. Generally ions carresponding to [M + H]⁺ and M⁺ are observed in the positive ion FAB spectra; ions such as [M ? H] ^? and M^?˙ are observed in the negative ion FAB spectra. The use of FAB mass spectra to distinguish the isomers is discussed. Comparisons of FAB, chemical ionization and electron impact mass spectra of the same isomers (wherever possible) are reported. The structural information obtained in the negative ion FAB spectra complement those obtained in the positive ion FAB spectra.     

Structural determination of glucosylceramides isolated from marine sponge by fast atom bombardment collision‐induced dissociation linked scan at constant B/E

Five glucosylceramides (GlcCers) were isolated by reversed phase high‐performance liquid chromatography from the MeOH extracts of a marine sponge, Haliclona (Reniera) sp., collected from the coast of Ulleung Island, Korea, and analyzed by fast atom bombardment mass spectrometry (FAB–MS) in positive‐ion mode. FAB‐mass spectra of these compounds included protonated molecules [M + H]⁺ and abundant sodiated molecules [M + Na]⁺ from a mixture of m‐NBA and NaI. The structures of these GlcCers, which were similar, were elucidated by FAB‐linked scan at constant B/E. To find diagnostic ions for their characterization, the GlcCers were analyzed by collision‐induced dissociation (CID) linked scan at constant B/E. The CID‐linked scan at constant B/E of [M + H]⁺ and [M + Na]⁺ precursor ions resulted in the formation of numerous characteristic product ions via a series of dissociative processes. The product ions formed by charge‐remote fragmentation provided important information for the characterization of the fatty N‐acyl chain moiety and the sphingoid base, commonly referred to as the long‐chain base. The product ions at m/z 203 and 502 were diagnostic for the presence of a sodiated sugar ring and β‐D ‐glucosylsphinganine, respectively. For further confirmation of the structure of the fatty N‐acyl chain moiety in each GlcCer, fatty acid methyl esters were obtained from the five GlcCers by methanolysis and analyzed by FAB–MS in positive‐ion mode. On the basis of these dissociation patterns, the structures of the five GlcCers from marine sponge were elucidated. In addition, the accurate mass measurement was performed to obtain the elemental composition of the GlcCers isolated from marine sponge. Copyright © 2009 John Wiley & Sons, Ltd.     

Matrix effects on the fast atom bombardment mass spectra of palladium complexes

In an attempt to identify and characterize the intermediates involved in multi-step palladium catalyzed coupling reactions, under fast atom bombardment (FAB) conditions, the selection of a matrix to enhance ion formation without degrading the palladium complex is critical. In general, it is observed that the analysis of tetrakis(triphenylphosphine)palladiurn(0) using glycerol, m-nitrobenzyl alcohol or o-nitrophenyl octyl ether as the FAB matrix compound produces several ions which correspond to complexes of the type Pd_xL_yO_z⁺ (L = PPh₃; x = 1-4; y = 1-4; z = 0-2), in addition to clusters containing one or more matrix molecules. FAB mass spectra generated using triethanolamine- or tetramethylene sulfone (sulfolane) are observed to contain ions related to the palladium(0) complex with little or no interference from ions related to the oxidation or reduction processes.     

Characterization of the Retro-[3+2] Reaction of Protonated 2,3′-Bisindolylmethanes by Electrospray Ionization–Tandem Mass Spectrometry

Twelve 2,3′-bisindolylmethanes with various substituents were investigated using electrospray ionization quadrupole time-of-flight tandem mass spectrometry in positive ion mode. A retro-[3+2] reaction was observed in the collision-induced dissociation spectra of protonated 2,3′-bisindolylmethanes for the first time. The mechanism of retro-[3+2] reaction was concerted or stepwise. For the concerted pathway, carbon–carbon bonds of a protonated compound simultaneously cracked and the m/z 208 ion ([C₁₅H₁₀D₂N]⁺) was observed with hydrogen–deuterium exchange labeling. The stepwise pathway goes through 1,3-hydrogen migration twice and the m/z 208 ion ([C₁₅H₁₀D₂N]⁺) and m/z 207 ion ([C₁₅H₁₁DN]⁺) were detected with deuterium labeling. In the deuterium-labeled tandem mass spectrum for one compound, only the peak at m/z 208 was present at high abundance, suggesting that the concerted pathway is more likely. In addition, the substituents have no obvious trends on the ratios of the product intensity to the base intensity, further supporting the concerted pathway.     

Formation and fragmentation of the [M + Na]+ ion of glycosides in fast atom bombardment mass spectrometry

Positive-ion fast atom bombardment (FAB) mass spectra of flavonol and steroid glycosides with sodium chloride added showed well known characteristic features; of the appearance of [M + Na]⁺ peaks, disappearance of [M + H]⁺ peaks and a significant decrease in the peak heights of fragment ions. Compared with the features in the FAB mass spectra of crown ethers with addition of salt, and above features suggest a complexation between Na⁺ and the glycosides in matrix solution. The B/E-constant linked scanning technique was used to obtain structural information of the [M + Na]⁺ ion of the glycosides. The B/E spectra gave the daughter-ion peaks, suggesting that coordination of Na⁺ with the biosides and triosides occurs at the sugar moiety, whereas the coordination with the monoglycosides occurs at the aglycone moiety, except for monoglycosides in which the aglycone moiety does not contain significant oxygen functional groups such as OH and CO.     

Dissociation of the diphenylnitrile imine radical cation into benzonitrile and [phenylnitrene]+˙

The collision induced dissociation/mass analysed ion kinetic energy mass spectra of 2,5-diphenyltetrazole demonstrate the decay sequence [diphenyltetrazole]^+˙→ [diphenylnitrile imine]^+˙→ m/z 91. The m/z 91 ion was shown to be identical to the ion formed by loss of N₂ from the phenyl azide radical cation, thus suggesting the phenylnitrene structure for the m/z 91 ion.     

Electron impact-induced fragmentation of 15N-labelled 1,2,4-triazoles

The electron impact-induced fragmentation patterns of 3,5-diphenyl-lH-1,2,4-[4-¹⁵N]triazole, 4-ethyl-3,5-diphenyl-4H-1,2,4-[4-¹⁵N]triazole, l-ethyl-3,5-diphenyl-lH-1,2,4-[4-¹⁵N]triazole and the corresponding unlabelled compounds were established from exact mass measurements and from metastable ion evidence. Evidence for two fragmentation mechanisms was established for the formation of the m/z 104 peak in the spectrum of the 4-ethyl compound. Only the 1-alkylated triazole exhibited an intense peak at m/z 131. Major peaks at m/z 221 (222) and 118 are characteristic of the investigated triazoles.     

Ion-molecule reactions observed for nitroaromatic compounds in negative ion fast atom bombardment mass spectrometry

Analyses of a series of nitroaromatic compounds using fast atom bombardment (FAB) mass spectrometry are discussed. An interesting ion-molecule reaction leading to [M + O ? H]^? ions is observed in the negative ion FAB spectra. Evidence from linked-scan and collision-induced dissociation spectra proved that [M + O ? H]^? ions are produced by the following reaction: M + NO₂^? → [M + NO₂]^? → [M + O ? H]^?. These experiments also showed that M^?˙ ions are produced in part by the exchange of an electron between M and NO₂^? species. All samples showed M^?˙, [M ? H]^? or both ions in their negative ion FAB spectra. Not all analytes studied showed either [M + H]⁺ and/or M⁺˙ in the positive ion FAB spectra. No M⁺˙ ions were observed for ions having ionization energies above ～9 eV.     

Structural studies of polyhydroxybis(tetrahydrofuran)acetogenins from Annona squamosa using the combination of chemical derivatization and precursor-ion scanning mass spectrometry

The structure of squamocin polyhydroxybis(tetrahydrofuran)acetogenin from Annona squamosa L., was characterized by a combination of the chemical derivatization and precursor-ion scanning mass spectrometry. The lactone part of squamocin was modified with N,N-dimethylethylenediamine in the vapour phase to afford a strong positive charge at one end of the skeleton. The derivative was ionized by fast atom bombardment (FAB), and the product ion spectrum from [M + H]⁺ and the precursor ion spectrum from the m/z 72 ion [CH₂?CHN⁺H(CH₃)₂] generated by low-energy collision were acquired. The structure of the derivative could be characterized by the precursor-ion spetrum from the m/z 72 ion, but little structural information could be obtained from the production spectrum from [M + H]⁺ of the derivative. By the attachment of a tertiary amino group to one end of the skeleton, charge-remote fragmentation was facilitated and abundant and unique fragment ions were observed in the precursor-ion spectrum. Structural characterization of six other isolated compounds was also carried out, and two novel compounds were found by this technique. A similar derivatization was applied in the peptide leu-enkephalin, and full sequencing from the C-terminus using precursor-ion scanning from m/z 72 could be achieved.     

Analysis of tetrabenzyl N-giucosidic,N-mannosidic and N-galactosidic Isomers using fast atom bombardment/mass-analysed ion kinetic energy spectrometry

A series of new synthetic tetrabenzyl N-glucosidic, N-mannosidic and N-galactosidic isomers were investigated by fast atom bombardment (FAB)/mass-analysed ion kinetic energy (MIKE) spectrometry. The [M + H]⁺ ions were obtained with high abundance in the FAB spectra when using 3-nitrobenzyl alcohol as the matrix. The FAB/MIKE spectra provide characteristic daughter ions fragmented from selected molecular parent ions, allowing these isomers to be differentiated. In addition, an interesting rearrangement was found from the MIKE spectra, indicating that the benzyl (Bzl) group on the sugar ring is rearranged on to the N atom of the base (R) group to form [R + Bzl + H]⁺ and [R+ 2Bzl]⁺ ions.     

Mass spectra of some α-substituted phenyl-α,α′-dimethoxyl ketones and their derivatives

The mass spectra of some α-substituted phenyl-α,α′-dimethoxyl ketones (compounds 1) and their 2,4-dinitrophenylhydrazones (compounds 2) and semicarbazones (compounds 3) have been studied. The characteristic fragments at m/z (M ? 73) from compounds 1, m/z (M ? 253) from compounds 2 and m/z (M ? 130) from compounds 3 are abundant and proposed to be [ArCROCH₃]⁺. Fragmentations yielding [M⁺ ? 49] from compounds 2 are abnormal and probably involve the methoxyl and nitro groups. The intense peak at m/z 130 due to [CH₃OCH₂CNNHCONH₂]⁺ from compounds 3 corresponds to α-cleavage of the molecular ion. Some other fragments from these new compounds are interpreted in this paper.     

Fast atom bombardment (FAB) mass spectrometry of piperidine N-oxide derivatives and free radical quenching under FAB conditions

Mechanisms are proposed for the formation of M⁺, [M + 2H]⁺ and [M + 3H]⁺ ions in the fast atom bombardment (FAB) mass spectra of 4-(2,2,6,6-tetramethyl-1-oxyl)-piperidol and its carboxylates. Free radical quenching induced by the fast atom beam has been observed. The effects of temperature on the radical quenching and of acid on the FAB mass spectra are discussed. The experiment showed that the volatile liquid samples with vapour pressures higher than that for glycerol produced M⁺ even-electron molecular ions, and the FAB mass spectra were similar to the corresponding electron ionization mass spectra. For the solid samples, it was found that the free radicals were quenched during the FAB process so that the mononitroxide and dinitroxide compounds produced [M + 2H]⁺ and [M + 3H]⁺ ions, respectively. Further experiments showed that the intensities and stabilities of [M + 2H]⁺ and [M + 3H]⁺ ions could be improved by addition of acids.     

Differentiation of lisinopril and its RSS diastereomer by liquid chromatography combined with collision‐induced dissociation mass spectrometry

A simple and sensitive liquid chromatography tandem multiple‐stage mass spectrometry (HPLC/MS/MS) method suitable for bulk lisinopril analysis was developed, by which lisinopril and its RSS isomer were separated and differentiated. In the collision‐induced dissociation (CID) mass spectra of the [M + H]⁺ ions, the abundance of the fragment ion of m/z 246 for lisinopril was about two times higher than the ion of m/z 245; however, the former fragment ion was noted to be a little lower than the latter for RSS isomer at all collision energies. In the CID mass spectra of the [M + Li]⁺ ion, the abundance of the rearrangement ion of m/z 315 for the RSS isomer was about three times higher than that for lisinopril. Furthermore, the difference was supported by the results of energy‐resolved mass spectrometry (ERMS) in the test range of collision energies. Similar differences were also observed between the CID mass spectra of lisinopril and RSS isomer methylester, which indicated that the RSS isomer could be rapidly characterized by the CID mass spectra of both the protonated and lithium adduct ion. Elemental compositions of all the ions were confirmed by Fourier Transform ion cyclotron resonance ESI mass spectrometry (FT‐ICR‐ESI/MS). In addition, theoretical computations were carried out to support the experimental results. Copyright © 2009 John Wiley & Sons, Ltd.     

Odd-electron molecular ion and loss of toluene in fast atom bombardment mass spectra of some carotenoids

Positive-ion fast atom bombardment (FAB) and B/E linked scan FAB mass spectra of seven carotenoids are reported. In all cases the M ^+· ions are observed, and the [M + H]⁺ ions are absent in the hydrocarbons and weak in the oxygenated compounds. The usefulness of B/E linked scan FAB mass spectra to distinguish isomers and to attribute the loss of toluene from the M ^+· to an ionic fragmentation and not to a thermal process is discussed.     

Collision‐induced dissociation mass spectra of glucosinolate anions

Collision‐induced dissociation (CID) mass spectra of differently substituted glucosinolates were investigated under negative‐ion mode. Data obtained from several glucosinolates and their isotopologues (³⁴S and ²H) revealed that many peaks observed are independent of the nature of the substituent group. For example, all investigated glucosinolate anions fragment to produce a product ion observed at m/z 195 for the thioglucose anion, which further dissociates via an ion/neutral complex to give two peaks at m/z 75 and 119. The other product ions observed at m/z 80, 96 and 97 are characteristic for the sulfate moiety. The peaks at m/z 259 and 275 have been attributed previously to glucose 1‐sulfate anion and 1‐thioglucose 2‐sulfate anion, respectively. However, based on our tandem mass spectrometric experiments, we propose that the peak at m/z 275 represents the glucose 1‐thiosulfate anion. In addition to the common peaks, the spectrum of phenyl glucosinolate (β‐D ‐Glucopyranose, 1‐thio‐, 1‐[N‐(sulfooxy)benzenecarboximidate] shows a substituent‐group‐specific peak at m/z 152 for C₆H₅‐C(?NOH)S^?, the CID spectrum of which was indistinguishable from that of the anion of synthetic benzothiohydroxamic acid. Similarly, the m/z 201 peak in the spectrum of phenyl glucosinolate was attributed to C₆H₅‐C(?S)OSO₂^?. Copyright © 2009 John Wiley & Sons, Ltd.     

Formation of M+. ions under matrix fast atom bombardment conditions: Does charge exchange reaction occur?

The formation of molecular ions, M^+., under fast atom bombardment (FAB) conditions using a liquid matrix was examined by using a new type of synthesized compounds in which preferential M^+. peaks appear in their FAB spectra. The FAB spectra were compared with the corresponding mass spectra obtained by the electron impact (EI) ionization, chemical ionization (CI) and charge-exchange ionization (CEI) methods. All of the spectra showed preferential peaks of M^+. ion and a characteristic intense fragment ion peak originating from a β-fission. The FAB spectra were similar in the fragment ions appearing in the EI spectra and were very similar in the fragmentation pattern to the CEI spectra using Ar^+. and Xe^+. as the reagent ions. Further, the FAB spectra did not show any doubly charged ion peaks, while the 70 eV EI spectra showed the peaks of doubly charged molecular and/or fragment ions. The isobutane CI spectra of the synthesized compounds suggested that the formation of M^+. ions occurred through the CE reaction with isobutane ion, C₄H₁₀^+., and the CI spectra showed a marked intense fragment ion peak originating from the β-fission which seemed to occur characteristically in CEI processes. The results obtained suggested that the formation of M^+. ions under matrix FAB conditions occurred mainly by CE reactions between the analytes M and matrix molecular ions B^+. and/or fragment ions b^+..     

Identification of some isomeric [C8H6O]+˙ ions generated from phenyl substituted cyclic ketones using collisional activation

[C₈H₆O]⁺˙ ions with o-quinonoid ketene, benzocyclobutenone, phenyl ketene and benzofuran structures have been generated from various precursors. Their collisionally induced decompositions in both field free regions of a double focusing mass spectrometer with so-called reversed geometry have been studied using mass analysed ion kinetic energy scans and B/E linked scans. In both cases the abovementioned [C₈H₆O]⁺˙ structures can be distinguished–except the benzocyclobutenone ion which gives very similar spectra to the o-quinonoid ion–on the basis of the intensity ratios [m/z 77]/[m/z 76] and [m/z 104]/[m/z 102]. The stable [C₈H₆O]⁺˙ ions generated from the molecular ions of 7 -phenylbicyclo[3.1.1]heptan-6-one appear to have the phenyl ketene structure, as was suspected from previous kinetic energy release measurements.