Fluorophenyl Bilirubins: Synthesis and Stereochemistry

 Analogs of bilirubin with vinyl groups replaced by symmetrically-disposed o-fluorophenyls (1, bis-exo, and 2, bis-endo) were synthesized and characterized spectroscopically. Their ¹H NMR spectra and NOE data are consistent with an intramolecularly hydrogen-bonded ridge-tile conformation where each propionic acid group embraces an opposing dipyrrinone. Like bilirubin, 1 and 2 exhibit negative chirality induced circular dichroism (ICD) Cotton effects in chloroform containing quinine. Unlike bilirubin, however, in aqueous buffer containing human serum albumin, 2 exhibits a negative exciton chirality ICD, whereas that of 1 is positive.     

NC Palladacycles and C,C-chelating phosphorus ylide complexes: synthesis,X-ray characterization,and comparison of the catalytic activity in the Suzuki-Miyaura reaction

Six secondary amine palladacycles bearing monodentate ligands (1a, 2a), 1,2-bis(diphenylphosphino)ethane (dppe) and 1,3-bis(diphenylphosphino)propane (dppp) containing bridging and bidentate ligands (1b, 2b–d), and four C,C-type phosphorus ylide complexes containing thiourea (tu) (3a), phenyl isothiocyanate (4a), and bridging and terminal azide groups (5 and 5a) have been synthesized. Resulting complexes have been characterized by elemental analyses, IR, ¹H-, ¹³C{¹H}-, and ³¹P{¹H}-NMR spectroscopy with single crystal X-ray structure determination of 1a and 2a. The Pd in 1a and 2a occupies the center of a slightly distorted square planar environment formed by C_aryl, N_amine, N_pyridine, and Cl. The catalytic efficiency of complexes showed that in most cases, amine palladacycles display better catalytic activities than the phosphorus ylide Pd(II) complexes. Comparison between bidentate and bridging dppe complexes showed that dppe-bridged dimer 2d has higher catalytic activity than dppe bidentate complex.     

Fluorophenyl Bilirubins: Synthesis and Stereochemistry

Summary.  Analogs of bilirubin with vinyl groups replaced by symmetrically-disposed o-fluorophenyls (1, bis-exo, and 2, bis-endo) were synthesized and characterized spectroscopically. Their ¹H NMR spectra and NOE data are consistent with an intramolecularly hydrogen-bonded ridge-tile conformation where each propionic acid group embraces an opposing dipyrrinone. Like bilirubin, 1 and 2 exhibit negative chirality induced circular dichroism (ICD) Cotton effects in chloroform containing quinine. Unlike bilirubin, however, in aqueous buffer containing human serum albumin, 2 exhibits a negative exciton chirality ICD, whereas that of 1 is positive. Received May 22, 2001. Accepted May 29, 2001     

Synthesis of Functionalized Thiodisaccharides by Conjugate Addition

Abstract

Oligosaccharides containing thioglycosidic linkages are resistant to enzyme-catalysed hydrolysis and therefore interesting material for studies of carbohydrate hydrolases. Some of these were shown to be competitive inhibitors for several glycanases such as α-amylase,¹ cellobiohydrolase I and II,² and for α-l-fucosidase,³ a glycosidase. Thio-oligosaccharides have also been used to prepare column material for affinity chromatography to isolate carbohydrate hydrolases. In contrast, affinity material containing normal O-glycosidic bonds was hydrolysed and led to column deterioration. By employing this approach, affinity materials containing 1,4-dithiocellobiose and 1,4,4′-trithiocellotriose could be used successfully to separate the cellobiohydrolases of Trichoderma reesei.²     

Synthesis and Incorporation of k2U into RNA

Lysidine (k²C) is one of the most modified pyrimidine RNA bases. It is a cytidine nucleoside, in which the 2-oxo functionality of the heterocycle is replaced by the ϵ-amino group of the amino acid lysine. As such, lysidine is an amino acid-containing RNA nucleoside that combines directly genotype (C-base) with phenotype (lysine amino acid). This makes the compound particularly important in the context of theories about the origin of life and here especially for theories that target the origin of translation. Here, we report the total synthesis of the U-derivative of lysidine (k²U), which should have the same base pairing characteristics as k²C if it exists in the isoC-like tautomeric form. To investigate this question, we developed a phosphoramidite building block for k²U, which allows its incorporation into RNA strands. Within RNA, k²U can base pair with the counter base U and isoG, confirming that k²U prefers an isoC-like tautomeric structure that is also known to dominate for k²C. The successful synthesis of a k²U phosphoramidite and its use for RNA synthesis now paves the way for the preparation of a k²C phosphoramidite and RNA strands containing k²C.     

Dinuclear rhodium(II) pivalate complexes with N-donor ligands

Eight dinuclear rhodium(II) complexes containing various, (primarily, polyfunctional) N-donor ligands in the trans position with respect to the Rh-Rh bond were synthesized and characterized by X-ray diffraction. In the Chinese-lantern dinuclear rhodium(II) pivalates, Rh^II ₂ (μ-OOCCMe₃)₄(L)₂ (L is 2,3-diaminopyridine (2), 7,8-benzoquinoline (4), 2,2′:6′,2″-terpyridine (5), N-phenyl-o-phenylenediamine (7)), and Rh^II ₂ (μ-OOCCMe₃)₄L¹L² (3, L¹ is 2-phenylpyridine, L² = MeCN), the steric effects of the axial ligands are most strongly reflected in the Rh-N(L) and Rh-Rh bond lengths. The introduction of chelating ligands containing a conformationally rigid chelate ring leads to the cleavage of two carboxylate bridges to form the dinuclear double-bridged structure Rh^II ₂ (μ- OOCCMe₃)₂(OCCMe₃)₂(η²-L³)₂, where L³ is 8-amino-2,4-dimethylquinoline (6). The reaction of complex 7 containing coordinated N-phenyl-o-phenylenediamine with pyrrole-2,5-dialdehyde afforded the new Rh^II ₂(μ-OOCCMe₃)₄(L⁴)₂ complex (8) containing 5-(1-phenyl-1-H-benzimidazol-2-yl)-1H-pyrrole-2-carbaldehyde (L⁴) in the axial positions of the dirhodium tetracarboxylate fragment. The coordinated diamine differs in reactivity from the free diamine. The reaction of the former with the above dialdehyde affords the [1+1]-condensation product, viz., 5-{(E)-[(2-anilinophenyl)imino]methyl}-1-H-pyrrole-2-carbaldehyde, whereas the reaction of unsubstituted o-phenylenediamine gives 5-{(E)-[(2-aminophenyl)imino]methyl}-1-H-pyrrole-2-carbaldehyde (L⁵) . The reaction of the latter with Rh^II ₂(μ-OOCCMe₃)₄(H₂O)₂ affords the dinuclear complex Rh^II ₂(μ-OOCCMe₃)₂(OOCCMe₃)₂(η²-L⁵)₂ (9), which is an analog of complex 6 containing only two bridging carboxylate groups.__________Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 3, pp. 581–591, March, 2005.     

Novel coordination compounds: Mn(II), Co(II), Ni(II), Cu(II), and Zn(II) cations with acesulfame/N,N-diethylnicotinamide ligands

Abstract

Five coordination complexes with Mn²⁺ (1), Co²⁺ (2), Ni²⁺ (3), Cu²⁺ (4), and Zn²⁺ (5) containing acesulfame (ace) and N,N-diethylnicotinamide (dena) ligands were synthesized and structural binding properties investigated. Four compounds (1, 2, 4, and 5) were examined with single crystal X-ray diffraction methods. The structures containing Mn(II), Co(II), and Zn(II) were iso-structural. Six-coordination of metal cations were completed with two moles dena and four aqua ligands. The dena ligands were coordinated via pyridine nitrogen as neutral-monodentate. Charge stabilities of the complexes are complemented by two moles monoanionic ace ligands, located outside of the coordination unit. In the Cu(II) complex, the coordination is completed by acidic nitrogen and carbonyl oxygen atoms of two ace ligands and pyridine nitrogen of two moles dena ligands. The coordination to Cu(II) for ace ligands was monoanionic-bidentate. All metal cations in the structure are distorted octahedral. Thermal decomposition of complexes begins with removal of the aqua molecules from the structures and is completed by combustion of organic ligands. The final decomposition products of all structures have been identified as corresponding metal oxides. Some biological applications (anti-fungal/anti-bacterial) were studied using 1–5.     

Influence of the redox state of the ligand on the dealkylation of substituted methylcobaloximes in the presence of heavy metal ions

The synthesis of cobaloxime and methylcobaloxime containing sterically hindered 2,6-di-tert-butylphenol fragments in the ligand is described. Spectral studies of the demethylation of methylbis(dimethylglyoximato)cobalt (1a), methylbis(diphenylglyoximato)cobalt (1b), methylbis[methyl-(3,5-di-tert-butyl-4-hydroxyphenyl)glyoximato]cobalt (1c) pyridinates were carried out in the presence of Cd²⁺, Hg²⁺, Sn⁴⁺, Pb²⁺, and Pb⁴⁺ ions, The free radical forms of the complexes containing a phenoxy radical W the ligand are formed during oxidation. The ESR spectra are given. The unpaired electron in the periphery of the methylcobaloxime ligand1c interacts with the Co-CH₃ fragment through the conjugated systems, enhancing the donating properties of the equatorial ligand of the complex, which leads to the rapid cleavage of the Co-C bond. Therefore the demethylation of methylcobaloxime in the presence of heavy metal ions occurs in a significantly shorter time.Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 7, pp, 1822–1827, July, 1996.     

Synthesis,antioxidant and antitumor activities of some of new cyclobutane containing triazoles derivatives

Abstract

Thiosemicarbazides (2a–e) were obtained by the interaction of furan-2-carboxylic acid hydrazide (1) with five different isothiocyanate (RNCS) derivatives. By addition of KOH to the reaction medium, ethyl, allyl, phenyl and benzyl, p-tolyl substituted 1,2,4-triazoles (3a–e) were obtained. 3a–e were dissolved in dry acetone containing K₂CO₃ in the presence of 2-chloro-1-(3-methyl-3-mesitylcyclobutyl) ethanone (4) to give 3,4,5-trisubstituted 1,2,4-triazole sulfanyl compounds containing a cyclobutane ring (5a–e). The structures of the final compounds were confirmed by elemental analyses, FT-IR, ¹H-NMR and ¹³C-NMR. The antioxidant and antitumor properties of the synthesized compounds were also investigated. Three of the triazole derivatives with p-tolyl, benzyl and phenyl substituents (5c–e) displayed good antioxidant and antitumor activity in comparison to the standards.     

Design,synthesis, crystal structure and bioactivity evaluation of novel diethyl (arylfuranyl)(arylpyrazolylamino)methanephosphonates

A series of novel arylpyrazole derivatives containing aminomethanephosphonate and phenylfuran moieties were designed, synthesized and characterized by ¹H NMR, ³¹P NMR and IR spectroscopy and elemental analyses. The single crystal structure of diethyl [5-(4-chlorophenyl)furan-2-yl][3-cyano-1-(2,3,4-trifluorophenyl)-1H-pyrazol-5-ylamino]methanephosphonate (4l) was determined by X-ray diffraction. Preliminary bioassays showed that these phosphonates exhibit satisfactory insecticidal activities against Culexpipiens and Musca domestica at 0.1%. In particular, compound 4l exhibited a most promising KT50 value, which is superior to that of Dextraltetramethrin® and similar to Prallehtrin®. The structure-activity relationship was also preliminarily investigated.     

Synthesis and Herbicidal Activity of Novel Pyrimidinyl Derivatives Containing an α-Amino Phosphonate Moiety

In order to find novel pyrimidinyl carboxylic acid analogs with high activity and low toxicity, a series of novel pyrimidinyl derivatives containing an α-amino phosphonate moiety 5 was synthesized by the condensation of 4-(4,6-dimethoxypyrimidin-2-yloxy)phenoxyacetic 3a or propionic acids 3b with dialkyl α-amino substitutedbenzyl phosphonates 4. Their structures were characterized by spectroscopic data (IR, ¹H NMR, ³¹P NMR, MS) and elemental analyses. The results of preliminary herbicidal activities (in vitro) showed that most of these compounds exhibited higher herbicidal activities against dicotyledonous weeds (Brassica campestris L) than monocotyledonous weeds (Echinochloa crus-galli). Further bioassays (in vivo) indicated that some of compounds 5 possessed selective herbicidal activity against amaranth pigweed (A. retroflexus) in post-emergence treatment.

Supplemental materials are available for this article. Go to the publisher's online edition of Phosphorus, Sulfur, and Silicon and the Related Elements to view the free supplemental file.     

Solid-State and Solution FT-Raman Spectra of the Tetraiodine Dication I4 2+

Abstract

I₄ ²⁺ is the only known cyclic homopolyatomic cation or anion of iodine. It has a rectangular planar structure which may be thought of as containing two I₂ ⁺ units joined by a weak π?-π? 4 centre 2 electron bond.¹ In this paper we report our FT-Raman spectra of I₄ ²⁺, which conflict with those published by Gillespie et al. ¹ and present evidence that the peaks attributed to a species containing iodine in the +1 oxidation state are in fact due to I₄ ²⁺.     

Monoprotonated Sapphyrin–Pertechnetate Anion Interactions in Aqueous Media

The addition of aqueous pH 7 solutions of 7.2×10^-3?M pertechnetate to dilute aqueous 2.5% MeOH solutions containing a water-solubilized sapphyrin, 3,12,13,22-tetraethyl-8,17-bis[bis(hydroxyethyl)-amino)carbonylethyl]-2,7,18,23-tetramethylsapphyrin (1), gives rise to spectroscopic changes in the UV–Vis spectrum of 1 that are consistent with anion-binding and sapphyrin deaggregation. The spectroscopic changes induced by pertechnetate were found to differ dramatically from those induced by the addition of either pure water or dilute nitric acid; however, they were found to parallel those seen when sodium phosphate was added to solutions of 1 under analogous experimental conditions. Fits of the spectroscopic titration data to a 1:1 binding profile revealed that the effective K describing the interaction of pertechnetate anion with 1 was ca. 3900±300?M^-1; this value compares to the effective K of 23000±3000?M^-1 that describes the corresponding interaction of sodium phosphate with 1.     

The Effect of Trifluoroethoxy Groups on the Structures of Eight-Membered Ring-Containing Cyclic Phosphites 1

New phosphites 1–4 were synthesized from phosphorus trichloride and an appropriate diphenol followed by the addition of trifluoroethanol in the presence of triethylamine. These phosphites are to serve as precursors in the syntheses of biorelated hypervalent phosphoranes. ¹H, ¹⁹F, and ³¹P NMR spectra were recorded. X-ray analysis of 3 and 4 revealed that the sulfur-containing eight-membered ring was in a syn conformation that a allowed a sulfur donor interaction to the phosphorus atom, whereas for phosphite 2, the eight membered sulfonyl containing ring was in an anti conformation that did not allow a donor interaction to phosphorus from the oxygen atom of the sulfonyl group. Structural comparisons are made with related cyclic phosphites and phosphates having donor atoms in eight-membered rings.     

Synthesis and Characterization of a New (E, E)-Dioxime and Its Homo and Heteronuclear Complexes Containing Macrobicylic Moieties

A new N,N'-substituted diaminoglyoxime (H ₂ L) containing a diazatetraoxamacrobicycle [2.2.2_B] has been synthesized from an aromatic primary amine attached to the cryptand moiety and cyanogen-di-N-oxide. The BF₂ ⁺-capped Co(III) and heterotri-nuclear complexes of thevic-dioxime were prepared. The new compounds werecharacterized by a combination of elemental analysis and ¹H NMR,¹³C NMR, IR and MS spectral data.     

New heteroorganic betaines containing the (+)E15—C—E14—X(–) and (+)E15—C—E14(–) structural fragments (E15 = P,As; E14 = Si,Ge, Sn; X = C,S, O,NR)

The review surveys the data on the reactions of phosphorus and arsenic ylides with compounds containing E=X bonds (E = C, Si, Ge, or Sn; X = C or S), cyclic oligomers (R₂ES)_n (n = 2 or 3), and heavier analogs of carbenes. These reactions give rise to two new classes of heteroorganic betaines containing the ⁽⁺⁾E¹⁵—C—E¹⁴—X^(–) (I) and ⁽⁺⁾E¹⁵—C—E^14(–) (II) (E¹⁵ = P or As; E¹⁴ = Si, Ge, or Sn; X = C or S) structural fragments. Procedures for the synthesis of these compounds, their reactivities, the X-ray diffraction structures, and the electronic structures established by high-level quantum-chemical calculations are considered in detail. The carbon analogs of betaines of type I, viz., compounds bearing the ⁽⁺⁾P—C—C—X^(–) fragment (III), are also discussed. The latter were long considered as possible intermediates in the reactions of compounds containing the polar C=X bond (X = C, O, S, NR, etc.) with phosphorus ylides (classical Wittig and Corey—Chaykovsky reactions and related processes).     

Synthesis of Lewis a and Lewis X Pentasaccharides Based on N-Trichloroethoxycarbonyl Protection 1

Abstract

Thexyldimethylsilyl 4,6-O-benzylidene-2-deoxy-2-trichloroethoxycarbonylamino-β-D- glucopyranoside (4), having the 3-hydroxy group unprotected, is a versatile starting material for the synthesis of glucosamine containing oligosaccharides. Thus, reaction with galactosyl donor 5 or fucosyl donor 6 afforded the desired β(1-3)- and α(1-3)-linked disaccharides 7 and 8, respectively, in high yields. Reductive opening of the benzylidene moieties in 7 and 8 gave access to the 4-hydroxy groups in 9 and 10. Ensuing fucosylation of 9 or galactosylation of 10 led to Lewis A (Le^a) and Lewis X (Le^x) trisaccharide building blocks 13 and 14, respectively. Their transformation into glycosyl donors 19 and 20 and subsequent reaction with 3b-O-unprotected lactose derivative 23 as acceptor furnished the Le^a? and Le^x pentasaccharide precursors 24 and 25. Exchange of the N-trichloroethoxycarbonyl group for an N-acetyl group and removal of the O-benzyl and O-acetyl protective groups afforded the desired Le^a? and Le^x? pentasaccharides 1 and 2.

     

Synthesis and antiproliferative evaluation of bis-styrylbenzothiazol-3-ium salts

A series of bis-styrylbenzothiazol-3-ium salts containing different substituents 4–12 were synthesized from 2-methylbenzothiazole by condensation of quaternary salts 1–3 with p-substituted benzaldehydes. All compounds were characterized by IR, ¹H and ¹³C NMR, MS, and elemental analysis. Synthesized compounds 4–12 were screened for antitumor activities. Based on presented in vitro screening results we may conclude that compounds 4–6 and 9 showed the best cell growth inhibitory activity.