Single‐ended transition state finding with the growing string method |
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| Authors: | Paul M Zimmerman |
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| Affiliation: | Department of Chemistry, University of Michigan, Ann Arbor, Michigan |
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| Abstract: | Reaction path finding and transition state (TS) searching are important tasks in computational chemistry. Methods that seek to optimize an evenly distributed set of structures to represent a chemical reaction path are known as double‐ended string methods. Such methods can be highly reliable because the endpoints of the string are fixed, which effectively lowers the dimensionality of the reaction path search. String methods, however, require that the reactant and product structures are known beforehand, which limits their ability for systematic exploration of reactive steps. In this article, a single‐ended growing string method (GSM) is introduced which allows for reaction path searches starting from a single structure. The method works by sequentially adding nodes along coordinates that drive bonds, angles, and/or torsions to a desired reactive outcome. After the string is grown and an approximate reaction path through the TS is found, string optimization commences and the exact TS is located along with the reaction path. Fast convergence of the string is achieved through use of internal coordinates and eigenvector optimization schemes combined with Hessian estimates. Comparison to the double‐ended GSM shows that single‐ended method can be even more computationally efficient than the already rapid double‐ended method. Examples, including transition metal reactivity and a systematic, automated search for unknown reactivity, demonstrate the efficacy of the new method. This automated reaction search is able to find 165 reaction paths from 333 searches for the reaction of NH3BH3 and (LiH)4, all without guidance from user intuition. © 2015 Wiley Periodicals, Inc. |
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| Keywords: | transition state single‐ended string method |
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