Effect of a Single Repeat Sequence of the Human Telomere d(TTAGGG) on Structure of Single-Stranded Telomeric DNA d[AGGG(TTAGGG)\begin{document}$_6$\end{document}] |
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| Authors: | Tian-lei Guang Ya-ting Gao Xiao-dong Ye |
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| Affiliation: | a.Hefei National Laboratory for Physical Sciences at the Microscale, Department of Chemical Physics, University of Science and Technology of China, Hefei 230026, Chinab.CAS Key Laboratory of Soft Matter Chemistry, University of Science and Technology of China, Hefei 230026, China |
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| Abstract: | The structures of human telomeric DNA have received much attention due to its significant biological importance. Most studies have focused on G-quadruplex structure formed by short telomeric DNA sequence, but little is known about the structures of long single-stranded telomeric DNAs. Here, we investigated the structure of DNA with a long sequence of dAGGG(TTAGGG)\begin{document}$_6$\end{document}] (G\begin{document}$_6$\end{document}-DNA) and the effect of a single repeat sequence d(TTAGGG) (G\begin{document}$_{01}$\end{document}-DNA) on the structure of G\begin{document}$_6$\end{document}-DNA using sedimentation velocity technique, polyacrylamide gel electrophoresis, circular dichroism spectroscopy, and UV melting experiments. The results suggest that the G\begin{document}$_6$\end{document}-DNA can form dimers in aqueous solutions and G\begin{document}$_{01}$\end{document}-DNA can form additional G-quadruplex structures by binding to G\begin{document}$_6$\end{document}-DNA. However, G\begin{document}$_{01}$\end{document}-DNA has no effect on the structure of DNA with a sequence of dAGGG(TTAGGG)\begin{document}$_3$\end{document}] (G\begin{document}$_3$\end{document}-DNA). Our study provides new insights into the structure polymorphism of long human single-stranded telomeric DNA. |
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| Keywords: | Circular dichroism spectroscopy G-guadruplex Sedimentation velocity experiments |
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