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Analysis of Diazofluorene DNA Binding and Damaging Activity: DNA Cleavage by a Synthetic Monomeric Diazofluorene
Authors:Dr. Christina M. Woo  Dr. Nihar Ranjan  Dr. Dev P. Arya  Dr. Seth B. Herzon
Affiliation:1. Department of Chemistry, Yale University, 225 Prospect Street, New Haven, CT 06520‐8107 (USA) http://www.chem.yale.edu/herzongroup;2. Department of Chemistry, Clemson University, Clemson, SC 29634 (USA)
Abstract:
The lomaiviticins and kinamycins are complex DNA damaging natural products that contain a diazofluorene functional group. Herein, we elucidate the influence of skeleton structure, ring and chain isomerization, D‐ring oxidation state, and naphthoquinone substitution on DNA binding and damaging activity. We show that the electrophilicity of the diazofluorene appears to be a significant determinant of DNA damaging activity. These studies identify the monomeric diazofluorene 11 as a potent DNA cleavage agent in tissue culture. The simpler structure of 11 relative to the natural products establishes it as a useful lead for translational studies.
Keywords:cancer  DNA cleavage  DNA damage  natural products
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